Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00361 ATGGAGAATCACCATCTCCAGCACCAGCACCAGCACCAGCATGAGCACGAGGACGAGCAAGCCCCATCCTCCTCCGTATACCTACCTCAGCCCCCTCCTCCTGCTCCTCCTCCTTCTTCCTTCCATCATCTCCTTCATCAACAGCAACAGCAGCTTCTCAATTTCTGGTCCGCCCAGCGCCAAGAGATCGATCATGTCAACGATTTCAAGAACCACCAGCTCCCTCTCGCTCGCATCAAGAAGATCATGAAGGCCGATGAGGACGTTCGCATGATCTCCGCCGAAGCGCCCATTTTGTTCGCCAAGGCCTGCGAGCTCTTCATCCTCGAGCTCACGATTCGATCTTGGATCCACGCCGAAGAGAACAAGAGGCGCACACTCCAGAAGAACGACATCGCCGCTGCAATTACCCGCACTGATATTTTCGATTTCTTGGTTGATATTGTGCCTAGGGATGAGATCAAGGACGAGGCTGCCCTTGGTGGAATGATGGCTGCCCCTGGTGGAATGATGGCTGCCCCTGGTGGAATGATGGCTGCCCCTGCGAGTGGTGTTCCTTACTACTATCCGCCTATGGGCCAACCTGCCCCCCCTCCTGGTGGCATGATGATTGGACGGCCGGCACTGGATCCCACCGGAGTGTACGCGCAACAGCCTTCGCAAGCGTGGCAGTCAGTGTGGCAGACGGCGACGGATGATGGGTCCTTCGGCAGTGGCGGGAGCAGTGGACAGGGAAATCTAGATGGTCAGAGTTGA 756 0.5675 MENHHLQHQHQHQHEHEDEQAPSSSVYLPQPPPPAPPPSSFHHLLHQQQQQLLNFWSAQRQEIDHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWIHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAALGGMMAAPGGMMAAPGGMMAAPASGVPYYYPPMGQPAPPPGGMMIGRPALDPTGVYAQQPSQAWQSVWQTATDDGSFGSGGSSGQGNLDGQS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00361 251 MobiDBLite consensus disorder prediction 1 21 - -
Accr8g00361 251 SUPERFAMILY Histone-fold 39 145 IPR009072 GO:0046982
Accr8g00361 251 MobiDBLite consensus disorder prediction 1 42 - -
Accr8g00361 251 MobiDBLite consensus disorder prediction 214 251 - -
Accr8g00361 251 Gene3D Histone, subunit A 40 151 IPR009072 GO:0046982
Accr8g00361 251 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 47 166 - -
Accr8g00361 251 MobiDBLite consensus disorder prediction 213 251 - -
Accr8g00361 251 FunFam Nuclear transcription factor Y subunit gamma 42 151 - -
Accr8g00361 251 Pfam Core histone H2A/H2B/H3/H4 43 136 IPR007125 GO:0003677
Accr8g00361 251 MobiDBLite consensus disorder prediction 26 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00361 Accr-Chr8 5359391 5363085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00361 39 250 CCAAT-HAP5 Transcription Factor Family AT3G48590 82.326 5.35e-107 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Accr8g00361 CBFD_NFYB_HMF 3.9e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00361 - - csv:101213576 275.018