Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00342 ATGGCAGTTACATTGGCTAATGTTAACTCTGCTTCTGGCTTGAAAAAGCTTGACGAATACCTTCTCACCCGCAGTTATATAACTGGGTATCAAGCTTCAAAGGACGATATTACAGTATATACAACCTTGTCTCAGGCGCCATCGGCTGAGTATGTGAATGCTTCCCGGTGGTACAAGCACATCGATGCTCTTTTGAGAATCTCAGGTGTATCTGGTGATGGATCTGGAGTCAAGGTGGAGGGATCTCTTCCTGTAGAAGACGAGACCATTGCCACTCCTCCACCTGCTGACACAAAGGCCACATCCGCTGATGACGATGATGATGATGTGGATTTGTTTGGTGAAGAGACAGAAGAAGAGAAGAAGGCTGCTGAAGAACGGGCAGCTTCCGTGAAGGCATCTTCAAAGAAGAAAGAATCTGGAAAGTCATCTGTTTTGCTGGATGTGAAGCCCTGGGATGATGAGACAGACATGAAGAAGCTTGAGGAAGCAGTGAGAGGGGTTCAGATGGAAGGATTGAATTGGGGCGCCTCCAAACTTGCCCCTGTTGGGTACGGCATTAAGAAGATGCAAATTATGCTTACTATTGTGGATGACCTGGTTTCTGTTGACAATCTCATTGAGGAACATCTCATGAGCGAGCCAATTAATGAATATGTCCAGAGCTGTGACATTGTGGCCTTTAACAAAATATAA 696 0.4555 MAVTLANVNSASGLKKLDEYLLTRSYITGYQASKDDITVYTTLSQAPSAEYVNASRWYKHIDALLRISGVSGDGSGVKVEGSLPVEDETIATPPPADTKATSADDDDDDVDLFGEETEEEKKAAEERAASVKASSKKKESGKSSVLLDVKPWDDETDMKKLEEAVRGVQMEGLNWGASKLAPVGYGIKKMQIMLTIVDDLVSVDNLIEEHLMSEPINEYVQSCDIVAFNKI 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00342 231 MobiDBLite consensus disorder prediction 116 136 - -
Accr8g00342 231 FunFam Elongation factor 1-beta 1 like 135 231 - -
Accr8g00342 231 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 220 231 IPR001326 GO:0003746|GO:0005853|GO:0006414
Accr8g00342 231 SUPERFAMILY GST C-terminal domain-like 8 67 IPR036282 -
Accr8g00342 231 MobiDBLite consensus disorder prediction 78 136 - -
Accr8g00342 231 CDD EF1B 145 231 IPR014038 GO:0003746|GO:0006414
Accr8g00342 231 Gene3D - 135 231 IPR014717 -
Accr8g00342 231 FunFam Elongation factor 1-delta 1 3 78 - -
Accr8g00342 231 Gene3D - 2 76 - -
Accr8g00342 231 SUPERFAMILY eEF-1beta-like 139 231 IPR036219 -
Accr8g00342 231 Coils Coil 114 134 - -
Accr8g00342 231 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 8 231 - -
Accr8g00342 231 Pfam EF-1 guanine nucleotide exchange domain 144 231 IPR014038 GO:0003746|GO:0006414
Accr8g00342 231 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 1. 106 114 IPR001326 GO:0003746|GO:0005853|GO:0006414
Accr8g00342 231 SMART EF1_GNE_2 142 231 IPR014038 GO:0003746|GO:0006414
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00342 Accr-Chr8 4914946 4916417 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00342 5 231 Eukaryotic Initiation Factors Gene Family AT2G18110 78.070 5.92e-116 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00342 K03232 - cit:102608130 317.005