Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00338 ATGGACCTCCTGATAGAGTCTACCTCCGCCGCACATTTCTCTGGTCGGTGTCCTTCAACGACGACGTCGTCTTCTTCATTGTTATCTCCGACTGATGACGGTCCCGTTGGCCCTACGCAGCCATTTGTGATCGGGGTCTCTGGAGGTACGGCATCAGGCAAGACCTCTGTGTGTGATATGATCATCCAACAATTGCAAGATCATAGAGTGGTGTTAGTCTATCAGGACTCCTTCTACCGTGGTTTAACAGAAGAAGAATTGAAACGCGTCCATGAATATAATTTTGATCATCCTGACGCCTTTGATATAGAGGAACTTGTAGAGTGTATCAGCAAGCTTAAATCTGGACAGTCTGTTCATGTGCCGGTATATGATTTTAAGACACATCAGCGGTCGTCTGAAAAATATATGCAGGTCAATGCATCTGAGGTAATCATTTTGGAGGGCATACTGGTTTTTCATGAGCAACGTGTCCGCGACATGATGAATATGAAAATCTTTGTTGATACAGATGCTGATGTAAGGCTTGCCCGCAGAATAAGACGTGATACCGTTGACAGAGGTAGAGATGTACAGTCGGTACTGCAACAGTATTCAAAATTTGTTAAGCCTGCCTTTGATGATTTCATTCTTCCAACCAAAAAATATGCCGATATCATAATACCTCGTGGGAAAGAGAATGTGGTAGCAGTAGACTTGATCGTTCAACATATCCGCACTAAGCTTGGCCAACATAACCTCTGCAAATTATATCCGAATTTGATTGTTATCCAATCTACGTATCAGATTAGGGGCATGCACACTCTAATTCGTGACAAGAATGTATCAAAACACGATTTTGTTTTTTATTCAGATCGGCTTATTCGTTTGGTAGTGGAACACGGCCTAGGCCATCTGCCATTTACCGAAAAGCAAGTTATTACACCTACGGGATCAATTTACACTGGAGTTGATTTCTGTAAGAAATTGTGCGGCGTATCCGTCATTCGAAGTGGCGAAAGCATGGAGAATGCTTTGCGCGCATGTTGTAAAGGCATTAAAATAGGAAAAATTCTCATCCACCGTGAAGGTGATGAGACCCAGCTTATTTATGGGAAGCTTCCAAAAGATATTTCAGAGAGGCATGTTCTCCTTTTGGACCCAGTGCTTGGTACAGGTAACTCAGCCAGCCAAGCCATTGAGTGTCTCATACGAAATGGAGTTCCAGAGTCCCACATAATATTCCTCAACCTCATCTCTGCTCCTGAGGGAATACACCGTGTATGCAAACGTTTTCCATACCTGAAAATAGTCACTTCGGAGATTGAAGTTGGACTAAATGAAGAGTTTCGAGTCATACCAGGGTTGGGAGAATTTGGGGACCGCTATTTCGGTACTGACCAGTAA 1386 0.4336 MDLLIESTSAAHFSGRCPSTTTSSSSLLSPTDDGPVGPTQPFVIGVSGGTASGKTSVCDMIIQQLQDHRVVLVYQDSFYRGLTEEELKRVHEYNFDHPDAFDIEELVECISKLKSGQSVHVPVYDFKTHQRSSEKYMQVNASEVIILEGILVFHEQRVRDMMNMKIFVDTDADVRLARRIRRDTVDRGRDVQSVLQQYSKFVKPAFDDFILPTKKYADIIIPRGKENVVAVDLIVQHIRTKLGQHNLCKLYPNLIVIQSTYQIRGMHTLIRDKNVSKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVITPTGSIYTGVDFCKKLCGVSVIRSGESMENALRACCKGIKIGKILIHREGDETQLIYGKLPKDISERHVLLLDPVLGTGNSASQAIECLIRNGVPESHIIFLNLISAPEGIHRVCKRFPYLKIVTSEIEVGLNEEFRVIPGLGEFGDRYFGTDQ 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00338 461 PANTHER URIDINE KINASE 39 370 - -
Accr8g00338 461 FunFam Uridine kinase 245 459 - -
Accr8g00338 461 Gene3D - 245 459 IPR029057 -
Accr8g00338 461 Pfam Uracil phosphoribosyltransferase 259 459 - -
Accr8g00338 461 Pfam Phosphoribulokinase / Uridine kinase family 43 229 IPR006083 GO:0005524|GO:0016301
Accr8g00338 461 MobiDBLite consensus disorder prediction 13 41 - -
Accr8g00338 461 CDD PRTases_typeI 318 432 IPR000836 -
Accr8g00338 461 PRINTS Uridine kinase signature 187 198 - -
Accr8g00338 461 PRINTS Uridine kinase signature 116 131 - -
Accr8g00338 461 PRINTS Uridine kinase signature 173 183 - -
Accr8g00338 461 PRINTS Uridine kinase signature 209 222 - -
Accr8g00338 461 PRINTS Uridine kinase signature 41 58 - -
Accr8g00338 461 PRINTS Uridine kinase signature 71 82 - -
Accr8g00338 461 FunFam Uridine kinase 38 244 - -
Accr8g00338 461 MobiDBLite consensus disorder prediction 13 33 - -
Accr8g00338 461 Gene3D - 38 244 IPR027417 -
Accr8g00338 461 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 234 IPR027417 -
Accr8g00338 461 NCBIfam uridine kinase 42 241 IPR000764 -
Accr8g00338 461 CDD UMPK 43 241 IPR000764 -
Accr8g00338 461 SUPERFAMILY PRTase-like 244 460 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00338 Accr-Chr8 4835001 4840350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00338 1 461 PRT Gene Family AT3G27190 76.939 0.0 744
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00338 K00876 - gmx:100816209 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00338 8 4835001 4840350 Accr8g00338 8 4835001 4840350 ECH