Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00333 ATGGCTAGCTGTAGTTCTCTTTCATTGTGTCCATACAGCTTTTATCGTCACCTGAACCCAAAAAGGCGACCCATTTTATGCTCGCTTGGCTCTTCTTCGCTCGTAGGTGTTGATGGATCTAAAGTACCACGCAAAAGAACAAGAAAACTTGAAGGTCCTGGAAAAAGCATGGAAGACTCTGTTCAACGCAAGATGGAGCAATTTTATGAAGGATCTAATGGGCCACCCCTGCGAGTTCTTCCTATTGGTGGGTTGGGTGAAATAGGGATGAATTGCATGCTTGTTGGGAACCATGATCGTTATATCCTTATTGATGCTGGTGTCATGTTCCCAGACTATGATGAGCTTGGAGTCCAAAAGATTATACCTGATACGACATTTATAAGAAAATGGAGGCACAAAATTGAAGCACTTGTTATAACGCATGGCCATGAAGATCATATTGGTGCGTTGCCTTGGGTCATACCAGCATTGGACGCCCATACACCAATTTTTGCATCTTCCTTTACAATGGAGCTTATTAGAAAACGTTTGAAGGAGCATGGTATTTTTGTTCCATCACGACTCAAAGTATTTCGAACAAGGAAGAAGTTTGTGGCTGGGCCATTTGAAATAGAGCCTATCAGGGTGACCCATTCTATCCCTGATTGTTGTGGATTAGTTCTTCGCTGTTCTGATGGTACTATTCTTCATACTGGGGACTGGAAGATTGATGAATCACCACTAGATGGTAAAGTTTTTGACCGTGAAGTTTTGGAGGAACTCTCTAAAGAAGGAGTAACATTAATGATGAGTGATTCAACAAACATACTTTCACCTGGAAGAACAATGAGTGAATCTACGGTGGCAGATGCTCTGTTAAGGCATATTTCTGCTGCTAAAGGGAGGGTTATTACAACCCAGTTTGCATCAAATATACATCGTCTTGGAAGTGTGAAAGCTGCTGCTGATTTAACTGGTAGAAAAATGGTGTTTGTTGGTATGTCCTTAAGGACATATCTAGATGCAGCTTGGAAAGATGGAAAGGCACCATTTGATCCGTCCACCCTGGTGAAAGTGGAGGACATTGATGCTTATGCTCCTAAGGATTTGCTGATTGTAACAACTGGATCTCAGGCAGAACCTCGTGCTGCCTTGAATCTTGCATCGTATGGTGGTAGTCATTCTTTCAAACTGACCAAGGAAGACATAATTTTGTATTCAGCTAAGGTTATCCCTGGTAATGAGTCTCGCGTGATGAGAATGATGAACCGCATATCAGAGATTGGATCATCAATAATAATGGGGAAGAATGAGGGGCTGCACACATCTGGTCATGCTTATCGCGGAGAACTGGAGGAAGTACTTAGAATAGTGAAACCGCAACATTTTCTTCCCATACATGGAGAACTCTTGTTCCTGAAGGAGCATGAATTACTTGGAAAGTCAACTGGCATTCGACACACTGCTGTTATTAAGAATGGAGAGATGCTTGGCGTTTCACACTTGAGAAACAGAAGAGTCCTTTCCAATGGTTTTGTTTCCCTTGGAAAAGAGAATCTACAGTTGAAGTACAGTGATGGGGACAAAGCATTTGGTACATCAAGCGAACTCTTCATTGATGAAAGATTGAGAATTGCTTTAGATGGAATTATTGTGGTCAGCATGGAAATATTTCGCCCTCAGAATAATGAGAGTCATGTTGAAAACACCTTAAAAGGAAAGATAAGGATTACCACAAGATGCCTATGGCTTGACAAGGGAAAGCTGTTGGATGCGCTTTATAAGGCTGCTCATGCTGCACTTTCAAGCTGCCCGGTAAACTGTCCATTGTCTCACATGGAAAGAACTGTATCTGAGGTATTGAGGAAGTTGGTGAGGAAGTATAGTGGCAAAAGACCAGAAGTTATTGCTGTTGCTATAGAAAATCCTGCCGCCGTTCTTGCTGATGAGGTAAAAGCAAGGCTGTCAGGAAAATCTCACATGGGCCTTGGGATGCCATCATTGAGAAATGATGTGGATGGACGTCAAGAGGAAAAGAAGTCCAGTAAAATACCTTTAAAAAGAGATGATGGCGCTGATGTTGAAGGACTCCTACCTGAGGATGATATTCCTACTCCAAGTGGAGCCGAGGGTGATTTCGCTGATTCAGAGGATTCAGATGATTTTTGGAAAACATTCGTCACACCTTCAACCATAGAAAAGTCAATCAAAGCTACCAATGGTTATGTTCCAAGAAAGCAGCAAGAGTCCCAGCCGATGAAAGATGATTCTGATGACTCTGAAGAAGGCAAGTCTGAAGGCAAGCCTTCAAAAACAGTGAAGAGAAATAAATGGAAACCTGAGGAAGTGAAGAAGCTGATCGATATGCGTGGGGAGCTGAAAGAGAGGTTTCAGGTTGTGAAGGGAAGAATGGTCCTCTGGGAGGAGATATCTCAAAAGTTGTTGGCTGATGGTATCAAAAGAAGTCCAGGGCAATGTAAATCTCTGTGGACTTCTTTGATACAAAAATATGAGGAGATCAAGAATGGGAAGAGCAGCAAGAAAAGCTGGTCATATTGGGAGGACATGGACAGGGTAGTGTCAGATAACGAGGCACTAGCAGCAAAATGA 2592 0.4248 MASCSSLSLCPYSFYRHLNPKRRPILCSLGSSSLVGVDGSKVPRKRTRKLEGPGKSMEDSVQRKMEQFYEGSNGPPLRVLPIGGLGEIGMNCMLVGNHDRYILIDAGVMFPDYDELGVQKIIPDTTFIRKWRHKIEALVITHGHEDHIGALPWVIPALDAHTPIFASSFTMELIRKRLKEHGIFVPSRLKVFRTRKKFVAGPFEIEPIRVTHSIPDCCGLVLRCSDGTILHTGDWKIDESPLDGKVFDREVLEELSKEGVTLMMSDSTNILSPGRTMSESTVADALLRHISAAKGRVITTQFASNIHRLGSVKAAADLTGRKMVFVGMSLRTYLDAAWKDGKAPFDPSTLVKVEDIDAYAPKDLLIVTTGSQAEPRAALNLASYGGSHSFKLTKEDIILYSAKVIPGNESRVMRMMNRISEIGSSIIMGKNEGLHTSGHAYRGELEEVLRIVKPQHFLPIHGELLFLKEHELLGKSTGIRHTAVIKNGEMLGVSHLRNRRVLSNGFVSLGKENLQLKYSDGDKAFGTSSELFIDERLRIALDGIIVVSMEIFRPQNNESHVENTLKGKIRITTRCLWLDKGKLLDALYKAAHAALSSCPVNCPLSHMERTVSEVLRKLVRKYSGKRPEVIAVAIENPAAVLADEVKARLSGKSHMGLGMPSLRNDVDGRQEEKKSSKIPLKRDDGADVEGLLPEDDIPTPSGAEGDFADSEDSDDFWKTFVTPSTIEKSIKATNGYVPRKQQESQPMKDDSDDSEEGKSEGKPSKTVKRNKWKPEEVKKLIDMRGELKERFQVVKGRMVLWEEISQKLLADGIKRSPGQCKSLWTSLIQKYEEIKNGKSSKKSWSYWEDMDRVVSDNEALAAK 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00333 863 MobiDBLite consensus disorder prediction 743 773 - -
Accr8g00333 863 MobiDBLite consensus disorder prediction 41 57 - -
Accr8g00333 863 Pfam Zn-dependent metallo-hydrolase RNA specificity domain 434 471 IPR011108 -
Accr8g00333 863 Gene3D - 278 428 IPR042173 -
Accr8g00333 863 MobiDBLite consensus disorder prediction 731 773 - -
Accr8g00333 863 PANTHER RIBONUCLEASE J 1 863 - -
Accr8g00333 863 MobiDBLite consensus disorder prediction 38 57 - -
Accr8g00333 863 MobiDBLite consensus disorder prediction 665 688 - -
Accr8g00333 863 Gene3D - 772 833 - -
Accr8g00333 863 ProSiteProfiles Myb-like domain profile. 764 828 IPR001005 -
Accr8g00333 863 SMART Lactamase_B_5a 89 286 IPR001279 -
Accr8g00333 863 Gene3D - 81 493 IPR036866 -
Accr8g00333 863 CDD GT1 770 835 - -
Accr8g00333 863 Pfam Myb/SANT-like DNA-binding domain 769 852 IPR044822 -
Accr8g00333 863 Pfam Metallo-beta-lactamase superfamily 90 234 IPR001279 -
Accr8g00333 863 SUPERFAMILY Metallo-hydrolase/oxidoreductase 77 491 IPR036866 -
Accr8g00333 863 MobiDBLite consensus disorder prediction 652 714 - -
Accr8g00333 863 SMART sant 768 830 IPR001005 -
Accr8g00333 863 CDD RNaseJ_MBL-fold 80 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00333 Accr-Chr8 4756027 4765974 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00333 771 855 Trihelix Transcription Factor Family AT2G38250 33.333 5.26e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Accr8g00333 Lactamase_B 1.1e-10 CL0381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00333 - - qsa:O6P43_022564 1397.88