Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00329 ATGGGGTTTCATAACTTGGTTCTGCTACTCTCTTTTGCTTCTTGGTGCTTGTGTTCTGCTTCTCAGTTACAATCATCTCAAACCCAAGTGCTTCTTCAGCTAAAGAAGCACCTGGAGCACCCAAAACAACTAGATATATGGAAGGATCGTTGGGCTTCTTTTTGTTCTCCTTCTCCTTCTTCACAAGTAAATGTCACATGCCAAGGGAATTTCGTCACTGAGCTAAGCATAGTGGGCGATGCTAACCCATCAAAGGTTAGGGATTTTGATGGTTTTCCCGTTCAGAGTCAGACATTGTCAGGGAACTTCTCTATGGATTCTTTTGTGGCTACTCTTGCCAGGTTAACTAGCTTGAAAGTTCTTCGTCTTGTTTCCTTGGGCTTGTGGGGTCCACTTCCTAATAAAATCCAGAGGCTTTATGAGCTTGAACATTTGGACTTGAGTTCAAACTTTCTCTATGGGTCAATCCCTCCAAAGATTTCTGCCATTGTGAACCTTCAAATTCTTGCACTTGATGACAACTTCTTCAACAGTACAATTCCCATTTTGTTAAATTCTTTGACTAATTTGACAGTTCTTGGCTTGAGTAATAACAGATTGAAGGGTCAGTTAGGAGATTTTAGTGCTTTGAATGCCTTACAAGTGCTGGATTTGAGAGCCAATAGATTAGACTCTACACTACCAAATATGCCAAAAGGGTTAATAAGGCTTTTTCTGAGCAAAAACTCGTTCTCTGGTGAAATTCCCAGGCAGTATGGTCAGCTAAATAGGCTTCAACAGTTAGACATTTCATTCAATACACTCACAGGATCGCCTCCTTCTGAAATCTTCTCTTTGCCCAATATCACTTTCTTGAATTTGGCATCAAACATGTTAAGAGGTTCTCTTCACAACAACTTAAAATGTAGCAGTAAACTCAGATTTGTTGACATCTCACACTACAAATTGATGGGTTTCTTGCCTTCTTGTCTGGGAACAGAGCCACAAAACAGGGTTGTTAAGCTTGAAGGAAATTGCTTATCCTCTAAGTTTCAGCATCAGCATGCAGTAACATACTGCTCAGAGGTTCATGTGAAGAAGAATGACACTTCCAGAGTTGGAATGTTAGTTGGTATAATTATTGGAGCTTTTTTAGTAATTGTGGTTCTGACTTTGGGAATTGTTGTGTGTGGACGGTTTTGGCCTAGAGGGATTTCAAAGCATCATCTATTGAATAAAACAGTTCAAGATAGCTCTAAAGCTTCAGTTGGGCTCTCCAATGAGATTCTGGCTAATGCAAGATTTATTTCTCAAGCTTCCAAGTTAGGCCAAGAAGAGCTGCCCATGTGTCGGCCCTATTCTTTTGAAGAGCTTAACCAAGCTACAAATAATTTTCACGACTCTAACTTCATGGGTGAAAATTTATATGGGAAGCTTTACAGAGGAAAGCTAGAAAATGGGAAGCAAGTTGCAATAAGGAGCTTGCCACTGTCGAAAAAGTATTCATTCAGGAATTTCAAACTGAGGTTGGATTTGCTTGCAAGGCTTCGTCATCCTCATCTGGTATCTCTTTTGGGTCACTGCATTGATGGTGTTGTAGCAGAAAATAATGGCACAAACATATTTCTCATATATGAATATGTTCACAATGGAAGTTTCCAGAGTTACTTATCTGGAACTAGTTCCGGCAAGGTTTTCTGTTGGTCTGAGAGATTGGCGATTTTAGTTAGCATTGCCAAGGCAGTTCACTTTCTGCACACAGGAATGATACCCGGTTTCACTAAGAACCGGCTCAAAATGAACAATATATTGCTTAGCGAGAATTGGACGGCAAAATTGAGTGACTATGGACTGTCTATTATCTCAGAGGAAGCTCACATAAGTGAGGGAAAAGGAGAAAATGCCGGATCATGGGAAATGATAAGATTAGAAGATGATATTTATAGCTTTGGACTAATACTACTTGAGGCACTTCTTGGACCTTCAGTATCTGCTAAAAAAGAAGCAATTTTGCCGACTGTAACGGCGTGTTTCAGCAGTGAAGATGGGTGGAAGCAGATGGTGGACCCAGTAGTGCAAGCAAGTTGCTGCCAAGAATCTTTGTTGATTGTGATTTCCATCACAAACAAAAGCATTTCCACTGAATCTTGGAGCCGACCTTCCATTGAGGATGTTCTTTGGAACTTACAGTATGCTTCTCAAGTTCAAGAAACTGCTGATGCTGCAGATCACAGATTCGATCCTACTGCTACACCACATCTCCATCAGTAA 2250 0.4053 MGFHNLVLLLSFASWCLCSASQLQSSQTQVLLQLKKHLEHPKQLDIWKDRWASFCSPSPSSQVNVTCQGNFVTELSIVGDANPSKVRDFDGFPVQSQTLSGNFSMDSFVATLARLTSLKVLRLVSLGLWGPLPNKIQRLYELEHLDLSSNFLYGSIPPKISAIVNLQILALDDNFFNSTIPILLNSLTNLTVLGLSNNRLKGQLGDFSALNALQVLDLRANRLDSTLPNMPKGLIRLFLSKNSFSGEIPRQYGQLNRLQQLDISFNTLTGSPPSEIFSLPNITFLNLASNMLRGSLHNNLKCSSKLRFVDISHYKLMGFLPSCLGTEPQNRVVKLEGNCLSSKFQHQHAVTYCSEVHVKKNDTSRVGMLVGIIIGAFLVIVVLTLGIVVCGRFWPRGISKHHLLNKTVQDSSKASVGLSNEILANARFISQASKLGQEELPMCRPYSFEELNQATNNFHDSNFMGENLYGKLYRGKLENGKQVAIRSLPLSKKYSFRNFKLRLDLLARLRHPHLVSLLGHCIDGVVAENNGTNIFLIYEYVHNGSFQSYLSGTSSGKVFCWSERLAILVSIAKAVHFLHTGMIPGFTKNRLKMNNILLSENWTAKLSDYGLSIISEEAHISEGKGENAGSWEMIRLEDDIYSFGLILLEALLGPSVSAKKEAILPTVTACFSSEDGWKQMVDPVVQASCCQESLLIVISITNKSISTESWSRPSIEDVLWNLQYASQVQETADAADHRFDPTATPHLHQ 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00329 749 Gene3D Transferase(Phosphotransferase) domain 1 541 742 - -
Accr8g00329 749 SUPERFAMILY Protein kinase-like (PK-like) 440 723 IPR011009 -
Accr8g00329 749 Gene3D Ribonuclease Inhibitor 234 369 IPR032675 -
Accr8g00329 749 Gene3D Ribonuclease Inhibitor 24 233 IPR032675 -
Accr8g00329 749 SMART LRR_typ_2 255 279 IPR003591 -
Accr8g00329 749 SMART LRR_typ_2 210 233 IPR003591 -
Accr8g00329 749 SMART LRR_typ_2 139 163 IPR003591 -
Accr8g00329 749 SMART LRR_typ_2 187 209 IPR003591 -
Accr8g00329 749 Pfam Leucine rich repeat 165 223 IPR001611 GO:0005515
Accr8g00329 749 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 234 358 - -
Accr8g00329 749 Gene3D Phosphorylase Kinase; domain 1 422 540 - -
Accr8g00329 749 ProSiteProfiles Leucine-rich repeat profile. 189 211 IPR001611 GO:0005515
Accr8g00329 749 SUPERFAMILY L domain-like 94 352 - -
Accr8g00329 749 ProSiteProfiles Protein kinase domain profile. 458 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00329 749 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 541 742 - -
Accr8g00329 749 Pfam Protein tyrosine and serine/threonine kinase 464 652 IPR001245 GO:0004672|GO:0006468
Accr8g00329 749 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 91 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00329 Accr-Chr8 4718118 4722484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00329 7 664 Miscellaneous Gene Families AT5G14210 49.640 0.0 602
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Accr8g00329 PK_Tyr_Ser-Thr 7.3e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00329 - - pcin:129308796 1249.57