Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00326 ATGTCAAGATGGTTGTCAGATGATTACTCGCCAAGGAATGCATCTGCTGATGATCACATGCATGAAAGAGAGACATCAAGCCCAGAAAGTGGTGAACTCATATGTGAAAGTTCAGAGGGCAAAAAATCTAGATCATCAAGAAACAGTGCAGGAGTTGATTGTTTCTGCCCTTCAAGTAAAGAAGATTTTGATTCTGAGGAGAAGTTACTTGTGGACAATATGGATGAAGATGAGGAACATAGCGGATCTTCTTATGTTAGTCACCCTTCATCAAATCCTGAAGATGGGGGCTTAGTAGCAATGCAGAGAAACGCAAACAGCATCCAGAGTTGCAGAAGTGTTTCAGAATTTGAAATGATCAAGAAAATAAATGAAGGAACTTATGGTATTGTCTATAAAGCTAAGGATAAGAAGACCGGGGAAATTGTAGCATTGAAGAAGGTGAAGATGAATATGGAAAGAGATGGCTTTCCAGTGTCCTCTTTGAGGGAAATAAATATTCTCTCATCGTTTAATCATCCTTCTATTGTGGAAGTTAAAGAAGTGGCTGTAGATGATTTTGATGGTGTTTTCATGGTAATGGAGTATATGGAGTGTGACCTTAAAGGCCTCATAAGAATGATGAAGCGGCCCTTTAGTATAGGTGAAATAAAATCCTTGATGATGAAACTTCTCAAGGGTGTCAAGTATCTCCATGACAATTGGATTCTTCACAGAGATTTGAAGACATCTAATATTCTCATAAATAAAGAGGGTAAGCTGAAAATATGTGACTTTGGTTTATCCCGTCACTATGGAAGCCCACTCAAGCCATATACTCCTCTTGTGGTTACTTTATGGTATAGGGCTCCTGAGCTTCTTCTAGGTGCTAAAGAATACTCAACAGCGATTGATATGTGGTCAATTGGTTGCATAATGGCTGAATTAGTTGCTAAGTCACCTCTATTCCAGGGAAAATCTGAAATCGAGCAGCTTAATAACATTTTCCAAACCCTGGGCACGCCTAATGAGAAAATTTGGCCTGGAGTATCCAAATTGTCTGGATTTAAGGGCAACTTTGTTAAGCATCCGCACAATCTATTGCGGAAGAAGTTTCCAGTTGCATCCTTCATTGGATCGCCTGTTCTTTCTGAACTGGGATTTGACTTGTTGAGCAAGCTTCTAACTTATGACCCTGAAAAGAGGATATCTGCAGAAGCTGCTCTTCTTCATGACTGGTTCCATGAAGCCCCTCTTCCAAATTCTGACTTCAATATCAGATTACCTACAAAGCGCTGCTCGGACTGA 1287 0.4002 MSRWLSDDYSPRNASADDHMHERETSSPESGELICESSEGKKSRSSRNSAGVDCFCPSSKEDFDSEEKLLVDNMDEDEEHSGSSYVSHPSSNPEDGGLVAMQRNANSIQSCRSVSEFEMIKKINEGTYGIVYKAKDKKTGEIVALKKVKMNMERDGFPVSSLREINILSSFNHPSIVEVKEVAVDDFDGVFMVMEYMECDLKGLIRMMKRPFSIGEIKSLMMKLLKGVKYLHDNWILHRDLKTSNILINKEGKLKICDFGLSRHYGSPLKPYTPLVVTLWYRAPELLLGAKEYSTAIDMWSIGCIMAELVAKSPLFQGKSEIEQLNNIFQTLGTPNEKIWPGVSKLSGFKGNFVKHPHNLLRKKFPVASFIGSPVLSELGFDLLSKLLTYDPEKRISAEAALLHDWFHEAPLPNSDFNIRLPTKRCSD 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00326 428 SUPERFAMILY Protein kinase-like (PK-like) 111 413 IPR011009 -
Accr8g00326 428 SMART serkin_6 117 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00326 428 MobiDBLite consensus disorder prediction 12 43 - -
Accr8g00326 428 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Accr8g00326 428 FunFam Cyclin-dependent kinase G-2 199 428 - -
Accr8g00326 428 ProSiteProfiles Protein kinase domain profile. 117 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00326 428 CDD STKc_CDC2L1 111 407 IPR045267 GO:0004674|GO:0005524|GO:0006468
Accr8g00326 428 FunFam cyclin-dependent kinase G-2 isoform X1 102 198 - -
Accr8g00326 428 Gene3D Phosphorylase Kinase; domain 1 99 198 - -
Accr8g00326 428 PANTHER CELL DIVISION PROTEIN KINASE 115 413 - -
Accr8g00326 428 Pfam Protein kinase domain 117 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00326 428 Gene3D Transferase(Phosphotransferase) domain 1 199 418 - -
Accr8g00326 428 MobiDBLite consensus disorder prediction 1 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00326 Accr-Chr8 4695538 4697256 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00326 108 413 Core Cell Cycle Gene Families AT5G10270 46.894 1.15e-88 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Accr8g00326 Pkinase 2.1e-73 CL0016