Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00325 ATGGCAGCAGGGCGGGACAATGTTCTGAGGAGAAGAGAATCCTACAAAGATCGTTCCAATAAGGAATTTGATCATTATGGTAATGGTTCTTCTGGCGTGGCAGTGCATCGATCTTGCAGCAGCCGCCATGTCTCATATAAGAACGGTCGTAGATCCTCTGATTTTGAGGATTCAGATCCTAGACGGATTGAGTCTTATGGTGAAGTTGTGGACGGTGAAAATCCTCATGAACCACCAGAGAAGAGAAGAAAAATTTCTCCAATTGTTTGGGACTTGGCAGAAAAGGAGATAATATCTTCAAAGAATGGCACAGCACACGTAACTTCGTTGTCTCCATTTTGTCCATCACAGCAAAGCTCTCATGGAGCCAGTGGTGTTTCTTCTGGTGGAGCCGTTAATACTGAGTCTCCAGCTGATTTCTCTAGTATATTACCTCAAGGAAATTCCTGCAATGAGGGTGAATATATTGTTCAGTCTGATAAGGAACATGTGCAAGGTTGGAATATCAAGATGTCAAGATGGTTGTCAGATGATTACTCGCCAAGGAATGCATCTGCTGATGATCACATGCATGAAAGAGAGACATCAAGCCCAGAAAGTGGTGAACTCATATGTGAAAGTTCAGAGGGCAAAAAATCTAGATCATCAAGAAACAGTGCAGGAGTTGATTGTTTCTGCCCTTCAAGTAAAGAAGATTTTGATTCTGAGGAGAAGTTACTTGTGGACAATATGGATGAAGATGAGGAACATAGCGGATCTTCTTATGTTAGTCACCCTTCATCAAATCCTGAAGATGGGGGCTTAGTAGCAATGCAGAGAAACGCAAACAGCATCCAGAGTTGCAGAAGTGTTTCAGAATTTGAAATGATCAAGAAAATAAATGAAGGAACTTATGGTATTGTCTATAAAGCTAAGGATAAGAAGACCGGGGAAATTGTAGCATTGAAGAAGGTGAAGATGAATATGGAAAGAGATGGCTTTCCAGTGTCCTCTTTGAGGGAAATAAATATTCTCTCATCGTTTAATCATCCTTCTATTGTGGAAGTTAAAGAAGTGGCTGTAGATGATTTTGATGGTGTTTTCATGGTAATGGAGTATATGGAGTGTGACCTTAAAGGCCTCATAAGAATGATGAAGCGGCCCTTTAGTATAGGTGAAATAAAATCCTTGATGATGAAACTTCTCAAGGGTGTCAAGTATCTCCATGACAATTGGATTCTTCACAGAGATTTGAAGACATCTAATATTCTCATAAATAAAGAGGGTAAGCTGAAAATATGTGACTTTGGTTTATCCCGTCACTATGGAAGCCCACTCAAGCCATATACTCCTCTTGTGGTTACTTTATGGTATAGGGCTCCTGAGCTTCTTCTAGGTGCTAAAGAATACTCAACAGCGATTGATATGTGGTCAATTGGTTGCATAATGGCTGAATTAGTTGCTAAGTCACCTCTATTCCAGGGAAAATCTGAAATCGAGCAGCTTAATAACATTTTCCAAACCCTGGGCACGCCTAATGAGAAAATTTGGCCTGGAGTATCCAAATTGTCTGGATTTAAGGGCAACTTTGTTAAGCATCCGCACAATCTATTGCGGAAGAAGTTTCCAGTTGCATCCTTCATTGGATCGCCTGTTCTTTCTGAACTGGGATTTGACTTGTTGAGCAAGCTTCTAACTTATGACCCTGAAAAGAGGATATCTGCAGAAGCTGCTCTTCTTCATGACTGGTTCCATGAAGCCCCTCTTCCAAATTCTGACTTCAATATCAGATTACCTACAAAGCGCTGCTCGGACTGA 1797 0.4096 MAAGRDNVLRRRESYKDRSNKEFDHYGNGSSGVAVHRSCSSRHVSYKNGRRSSDFEDSDPRRIESYGEVVDGENPHEPPEKRRKISPIVWDLAEKEIISSKNGTAHVTSLSPFCPSQQSSHGASGVSSGGAVNTESPADFSSILPQGNSCNEGEYIVQSDKEHVQGWNIKMSRWLSDDYSPRNASADDHMHERETSSPESGELICESSEGKKSRSSRNSAGVDCFCPSSKEDFDSEEKLLVDNMDEDEEHSGSSYVSHPSSNPEDGGLVAMQRNANSIQSCRSVSEFEMIKKINEGTYGIVYKAKDKKTGEIVALKKVKMNMERDGFPVSSLREINILSSFNHPSIVEVKEVAVDDFDGVFMVMEYMECDLKGLIRMMKRPFSIGEIKSLMMKLLKGVKYLHDNWILHRDLKTSNILINKEGKLKICDFGLSRHYGSPLKPYTPLVVTLWYRAPELLLGAKEYSTAIDMWSIGCIMAELVAKSPLFQGKSEIEQLNNIFQTLGTPNEKIWPGVSKLSGFKGNFVKHPHNLLRKKFPVASFIGSPVLSELGFDLLSKLLTYDPEKRISAEAALLHDWFHEAPLPNSDFNIRLPTKRCSD 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00325 598 Gene3D Transferase(Phosphotransferase) domain 1 369 588 - -
Accr8g00325 598 Gene3D Phosphorylase Kinase; domain 1 269 368 - -
Accr8g00325 598 FunFam cyclin-dependent kinase G-2 isoform X1 272 368 - -
Accr8g00325 598 PANTHER CELL DIVISION PROTEIN KINASE 285 583 - -
Accr8g00325 598 SMART serkin_6 287 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00325 598 MobiDBLite consensus disorder prediction 1 86 - -
Accr8g00325 598 MobiDBLite consensus disorder prediction 182 213 - -
Accr8g00325 598 MobiDBLite consensus disorder prediction 47 86 - -
Accr8g00325 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 406 418 IPR008271 GO:0004672|GO:0006468
Accr8g00325 598 MobiDBLite consensus disorder prediction 109 147 - -
Accr8g00325 598 ProSiteProfiles Protein kinase domain profile. 287 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00325 598 MobiDBLite consensus disorder prediction 1 24 - -
Accr8g00325 598 SUPERFAMILY Protein kinase-like (PK-like) 281 583 IPR011009 -
Accr8g00325 598 FunFam Cyclin-dependent kinase G-2 369 598 - -
Accr8g00325 598 CDD STKc_CDC2L1 281 577 IPR045267 GO:0004674|GO:0005524|GO:0006468
Accr8g00325 598 Pfam Protein kinase domain 287 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00325 598 MobiDBLite consensus disorder prediction 177 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00325 Accr-Chr8 4695028 4697256 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00325 278 583 Core Cell Cycle Gene Families AT5G10270 46.626 1.79e-87 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Accr8g00325 Pkinase 5.4e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00325 K08818 - gmx:100788840 664.07