Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00314 ATGATTGGCAGCGATTTTTCTAGCGTTTTGTATCTGCCTCCTAAGTTTGGTCCTACAGCGTCAACCTTGATTGACAAAGAAGCCATTATTGAGGATTCTAGTGGAAAGCAATGGACGGTACAAATATCAATTGTCGACAAGTCTTATGCTTTTCAGGAGGGATGGAAAGCTTTTTCTATGGAACATGGGCTTGAAGTTGGACATTTTTTGGTGTTCCATTACATGGGAAGATCTCACTTTGTTGTCAAGGTTTTTGATAGATCTGGTTGTGAAAAAACTGATTTTCCCAATCAGAGAAAGCAGAAGAAGAGAAAAACGATCACAGTTGACCTTGATGATAGCGATGAATTGTTAAATAGACAAGGTTTCTTATCCTCGGAGTCAGACACGGGAAAGACGCAAAGTCAGGACGAGGTTGTTGGAGTGAAAGACAGTGCAGAAATTAACGAAGAGAAAACCTCAGAAAATAGTAATAGTAACAGAAGGATCCGATCTTTGAACGAAGACAAAAACTATGAAGATCCTTGTTACTTGAAAGACCGAGACTTTGGAGACAGAGAAAGAGAGGACAGGGATAGTCTTATGTTTGATGCGTTCAGGTGTGAAATATTGAACAATTCAGGTGTTCACAGGACTGGCAAATTTACAAGCAGCAATGAAATAGTTGTTACAAGTATCTATACCAACGATCCTCTGCTTGAAGATATGATGAGAAATGGAGCAACTCAAGATCTGTTTGAAGTTGAATTGACCAAAAGAAGTCATTTTCTTGAAGAGTTAGACATGAGTACATTCTCCTGTGAGAGACATTCTCGTGAAAACAAGATTCCTGAGCATCTTCTGATCCCATGTACCATGCAACATGAAGAAATCAAAGAGAACTCAGGTAACAAAGAGTTAGACAAGAGTACATTCTCCTGTGAGAGACATTCTCGTGAAAACAAGATTCCTAAGCATCTTTTGATCCCATGTACCATGCAACATGAAGAAATCAAAGAGAACTCAGGTAACAAAGAATTAGACAAGAGTACATTCTCCTGTGAGAGACATTCTCGTGAAAACAAGATTCCTGAGCATCTTTTGATCCCATGTACCATGCAACATGAGGAAATCAAAGAGAACTCAGAGACTCAGCAATTATTGATATCAAAAGAGGGATATCCTTTGCATGCTGGCAATTGTGAAAATACCAGAGAGATGTTTGTCGGGTTACATGTATCCCTGGACGTTCCCATGTGCCATGCTACAGGGAAAATGGAGAGAATGATTCAAAAAGAGCTTCTGGACATGACTCCAGATGTGTGCATATACAATGATCAACTCCAGACACTTATTGGAGATCAAAGCAGCGATCTAAATTCAGTGAAAGCTGTACCTTCTGACTGTGGAGCTGCCCACATGCTTGCATCCATCTCAGAGACAGACAGTAAAAACAAGGCGGCTGGTGGCGCTCCGGAGGAGACAATGGCCGATCCTTTACCGTGA 1485 0.4067 MIGSDFSSVLYLPPKFGPTASTLIDKEAIIEDSSGKQWTVQISIVDKSYAFQEGWKAFSMEHGLEVGHFLVFHYMGRSHFVVKVFDRSGCEKTDFPNQRKQKKRKTITVDLDDSDELLNRQGFLSSESDTGKTQSQDEVVGVKDSAEINEEKTSENSNSNRRIRSLNEDKNYEDPCYLKDRDFGDREREDRDSLMFDAFRCEILNNSGVHRTGKFTSSNEIVVTSIYTNDPLLEDMMRNGATQDLFEVELTKRSHFLEELDMSTFSCERHSRENKIPEHLLIPCTMQHEEIKENSGNKELDKSTFSCERHSRENKIPKHLLIPCTMQHEEIKENSGNKELDKSTFSCERHSRENKIPEHLLIPCTMQHEEIKENSETQQLLISKEGYPLHAGNCENTREMFVGLHVSLDVPMCHATGKMERMIQKELLDMTPDVCIYNDQLQTLIGDQSSDLNSVKAVPSDCGAAHMLASISETDSKNKAAGGAPEETMADPLP 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00314 494 ProSiteProfiles B3 DNA-binding domain profile. 1 88 IPR003340 GO:0003677
Accr8g00314 494 MobiDBLite consensus disorder prediction 473 494 - -
Accr8g00314 494 Coils Coil 149 169 - -
Accr8g00314 494 SMART B3_2 6 88 IPR003340 GO:0003677
Accr8g00314 494 MobiDBLite consensus disorder prediction 143 166 - -
Accr8g00314 494 PANTHER B3 DOMAIN-CONTAINING 13 171 - -
Accr8g00314 494 Gene3D - 1 90 IPR015300 -
Accr8g00314 494 SUPERFAMILY DNA-binding pseudobarrel domain 1 90 IPR015300 -
Accr8g00314 494 MobiDBLite consensus disorder prediction 122 166 - -
Accr8g00314 494 Pfam B3 DNA binding domain 9 87 IPR003340 GO:0003677
Accr8g00314 494 MobiDBLite consensus disorder prediction 122 140 - -
Accr8g00314 494 CDD B3_DNA 1 86 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00314 Accr-Chr8 4503542 4506732 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00314 10 92 B3 DNA Binding Superfamily AT5G66980 36.782 2.05e-11 63.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Accr8g00314 B3 3.1e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00314 - - pcin:129308262 469.544