Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00304 ATGGTGGGTTCGGCAGCTCTGGCACCAGAGACAAACTCAGAGGTATTTTCATGGCTAAAATCTCTTCCTCTTGCCCCAGAGTACCGCCCTAGCTTGGCTGAGTTTCAAGATCCGATTTCATACATTTTTAAGATCGAGAAGGAAGCTTCCAAGTATGGAATCTGCAAAATTGTTCCCCCCGTGCCACCTTGTTCGAAGAAGACAGCAATTGCGAATCTTAACCGCTCGTTGGCTGCACGAGCTGCCTCCTCTGACTCTTCTAATTCGAAATCCCAGCCTGCATTCACCACAAGGCAGCAGCAGATCGGGTTCTGCCCTCGGAAGCAACGGCCAGCGCAGCGTCCTGTGTGGAAGAGTGGGGAATACTACACGTTTCAGGAATTTGAAGCGAAGGCCAAGGCTTTTGAGAAGAATTACCTCAAGAAATGGGCCAAGAAAGGCGGTCTTTCACCTCTGGAGATAGAAACACTTTATTGGAAGGCGACAGTGGACAAACCCTTTTCGGTGGAGTACGCAAATGATATGCCTGGTTCGGCTTTTGTTCCCGTGAATGGGAGAAAATATAGAGAGGCAGGGGAGGGAACGACTCTTGGTGAGACTGCATGGAACATGAGGTTGGTGTCACGGGCAAATGGTTCTCTGTTGAAGTTTATGAAGGAGGAGATTCCTGGTGTTACATCACCAATGGTGTACGTAGCTATGCTGTTCAGCTGGTTTGCTTGGCATGCAGAGGATCATGACCTGCATAGTTTGAATTACCTTCATATGGGGGCAGGCAAGACTTGGTATGGCGTGCCGCGGGATGCCGCTGTAGCATTTGAGGAAGTGGTCAGAATTCATGGTTATGGGGGAGAAATAAATCCTCTTGTTACTTTTGCTGTACTTGGGGAGAAAACCACAGTGATGTCGCCTGAAGTGTTTATTAGTGCAGGGGTTCCTTGCTGCAGGTTAGTGCAAAATGCTGGAGAATTTGTTGTCACATTTCCAAGAGCTTATCACACTGGATTTAGTCATGGATTTAATTGTGGGGAGGCAGCAAACATTGCGACACCTGAATGGTTGAGGGTTGCTAAAGATGCTGCTATTAGGAGGGCCTCAATAAATTATCCGCCCATGGTTTCACATTTTCAGTTACTTTATGATCTTGCCCTGGCTTTGTGTTCAAGAATTCCTGGGGGCATCAGTGCTGAACCACGGAGTTCTCGGCTTAGAGATAAGAGGAAAAGTGAAGGGGAAACTGTTATTAAAGAACTATTTGTCCAGGATGTATTACAGAACAATAACTTGCTTCATGGTCTTGGCAAAGGATCTGCTATGGTACTTCTTCCTCGGAGCTCTTCAGATATTTCTGTTTGCTCCAAATTACGTGTTGGTTCCCAGCAGCTGAAGGGGAATCCTGAGTATTCTCTCAGAGAATGCAGTTCTGAGGGAATGAATTCCTCAAAAGGTTTTGTTTCTGATGACCTGGTTTTCAGCAGAACCACACAAGTGAAGGGATTTTCAGTAAAAGAGAAGTTTGCTTCGTTGTGTGAAAGGAACAGGGTCTCCTCATTAAGTGTAAATGATAACACATGCTCTTCAAGTTCTCTGCCACCTCAAAGAGACACTGAAAGGGAGACAAGCCAAGGGGATGGGTTGTCAGACCAGAGACTATTTTCATGTGTTACTTGTGGTATACTAAGCTTTGCTTGTGTTGCTATTGTGCAGCCTAAGGAACCAGCTGCTAGGTACCTTATGTCAGCTGATTGTAGCTTCTTTAATGATTGGGTTGTTGGTTCTGGAGTAAGCATCAATAAGTATACACATGCCCATGGTGATGCAACTACTGCGAAAAGCACCTTTGCAGGATGGAAGGTCAAAAAAGCCCCAGACTATGATCTTCCTGTTCAATCTGGAGGATACCAGATACAGGTGGAAGATCAATCACATGAGGTAGCTTTACGTACTAGAGGACAGAAAGAAACATCAGCCCTTGGCTTATTGGCATCAGCATATGGAAATTCATCTGATTCAGAGGAAGATCAAGTTGACCCAGGGACTGCATTTAAGAATACGAGTTGTACCTTAAATTATTCTCAAGATGTTCGTGAGGCTGAAACATCAATGCTTTGTAACACTGGATGTTCCATTGAGGATAGAAGTGCTTCATCGTTGCCACATTCTGATGAAGATTCATCTAGATTGCATGTCTTCTGTCTGGAGCATGCTGCTGAAGTGGAGCAGCGACTTCAGCCAATAGGAGGAGCACACATATTACTCCTTTGTCATCCAGATTATCCCAAGGTAGAGGCTGAAGCAAAAAATGTGGCAGAAGAACTGGGTATTGGTGGCATATGGAAGAATCTTGCTTACAGAAATGCCACCCCAGAAGATGAGGAGAGGATCCAGTCGGCTCTGGATAGTGAGGAAGCTATTCCCGGAAATGCGGACTGGGCTGTAAAGCTGGGAATCAATCTCTTCTATAGTGCCAATCTTAGCCGCTCTCCTCTCTACAGTAAGCAGATGCCTTATAATTCTGTCATATATCATGCATTTGGCCGTAGTGCTCCAGCAAGGTCACCCACAGAACCCAAGGTTTATCAAAGAAGGACCAGCAAACAGAAAAAGGTGGTTGCTGGAAAATGGTGTGGCAAAGTTTGGATGTCCAATCAGGTCCATCCCCTTTTAGCTAAAAGAGATTCTGAGGATGATGATGAGAAAGTCTTACATGGTTGGTCATCGCCTGACCAGAAAATTGAGAGATCAGAAAGTGCTCCCACAGACAATTTTACTAATAGAAAATCTGCTAAGAAAAGGAAAATGACTGTAGAGAGTAGAAAAGCCGGGAAAGCCAGTTTTGCTGAGAGAGAATATGATTCCGATAATTCTATTGAAAAGAAATACAACCCACAGCAAAGGACATATTCTAGAACCAAACAAGCCAAATATTTTGACAGAGATGATGCAGCATCAGAGGAGGATTATTCTCCTGTGCAGCGATATGGAAAACCTACAGCAACGCAAGCCAAATACACTGAAAGTGATGAAGTGTCAGATGATTCAATTGATGATAATTCTCACATGCAGCAGGGAAGGAATTTTAAAATCAAAGAACCTAAATTCATTGACAGTGATGTCGTCTCAGATGATGCAATGGGATATGATTCTGATTCACAACTGAGGAGAGAGCTTAGCAATAAACAAATTGAAGATTCAGAAAGAGATGAAGTTTCAGAGGATTCCATGTGTGGTAGCTTTCTTAAACGGCGGAGGAAGACTTGTAAAAGCAAGCCAGCCAAATATGTTGCTAAAGATGCAATATCTGATGACCAAATGGAGGATCATTTTCAGAAGCAGCGAAGAAGGATTCCTAAAAGCAGACAAGATAGATACCTTGATGGAGAAGATATCATGGTATCTGATGACCAACTGGAGCATCGAATACATAAGCAGCAACGATCTAAAGGAAGACGGGCCAAACATTTCACTGGAGATGATATTACATCTGATGACCAACTGGAGGACCGTTCTGGCAAGTTTCATAGAAGGATTCCTAAAAGCAGACAAGATAAATGCCCAGTCAAGGAAGATGTGATATCTGATGACCAATTGGAGGATCACTTTCAGAAGCCACGTGGTACTATTCCAAAGAGCAGGCAAAATAAACGCAAGAATAAAATTATGGCCGACTCGTCTGATAACTATGCTCATCTGCTGCATAGAACTCCCAAGAGGAAGCAAGTTAAAAGCATGGATGAAGAAGACATAAATTCTGATGATCAAATGGAGGATTCATCTCTTCAGCAGCGAAGGAGGACTCTTCGAAGCCAGCAATCTAAATTAGAGGCACAGCAAAAAATGAAACAATCTAACTCTTGCCGTGTGAAACAGACATCCCGACCTCTAAAACGAAGCACTCAGCTGCAAGTAAAATCAAAGACTTCTCAGAAAATGAAGCAGCCTCTGCGAGGTCAGAAAAACCAACCTGATAAATTTAGAGATTTTAGCATGTGTTCGGAAGAGGAGGAAGAAGGTGGACCTAGCACACGCCTTAGAAAGAGAGTACCAAAAGTTGAGGAGTCTGAAGCAAAACCGAAAGGAAAGGTAATCCAAAGGAAGAAGGTGAACAATGCTACAGCTTTGAAGGTTTCCAAAACGAAGGATGAGGAAGCAGAATACGAGTGTGACATTGATGGGTGCACAATGAGTTTCAGCTCAAAACAGGAGTTAACAGTGCACAAGAGAAACATTTGTCCTGTAAAGGGATGCGGAAAGAAATTTTTCTCACATAAATATCTGGTGCAGCATCGTCGAGTTCATGAGGATGACCGCCCTCTGAGGTGCCCTTGGAAGGGCTGCAAGATGACCTTCAAGTGGGCATGGGCACGTACTGAGCATATTCGAGTGCATACCGGAGCTCGTCCATATGTTTGTGCTGAGCCAGGGTGTGGGCAAACATTCAGATTTGTTTCTGATTTCAGTCGCCACAAGCGAAAGACTGGCCATTCAACAAAGAAGAGTCGTTAA 4506 0.4403 MVGSAALAPETNSEVFSWLKSLPLAPEYRPSLAEFQDPISYIFKIEKEASKYGICKIVPPVPPCSKKTAIANLNRSLAARAASSDSSNSKSQPAFTTRQQQIGFCPRKQRPAQRPVWKSGEYYTFQEFEAKAKAFEKNYLKKWAKKGGLSPLEIETLYWKATVDKPFSVEYANDMPGSAFVPVNGRKYREAGEGTTLGETAWNMRLVSRANGSLLKFMKEEIPGVTSPMVYVAMLFSWFAWHAEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRIHGYGGEINPLVTFAVLGEKTTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALALCSRIPGGISAEPRSSRLRDKRKSEGETVIKELFVQDVLQNNNLLHGLGKGSAMVLLPRSSSDISVCSKLRVGSQQLKGNPEYSLRECSSEGMNSSKGFVSDDLVFSRTTQVKGFSVKEKFASLCERNRVSSLSVNDNTCSSSSLPPQRDTERETSQGDGLSDQRLFSCVTCGILSFACVAIVQPKEPAARYLMSADCSFFNDWVVGSGVSINKYTHAHGDATTAKSTFAGWKVKKAPDYDLPVQSGGYQIQVEDQSHEVALRTRGQKETSALGLLASAYGNSSDSEEDQVDPGTAFKNTSCTLNYSQDVREAETSMLCNTGCSIEDRSASSLPHSDEDSSRLHVFCLEHAAEVEQRLQPIGGAHILLLCHPDYPKVEAEAKNVAEELGIGGIWKNLAYRNATPEDEERIQSALDSEEAIPGNADWAVKLGINLFYSANLSRSPLYSKQMPYNSVIYHAFGRSAPARSPTEPKVYQRRTSKQKKVVAGKWCGKVWMSNQVHPLLAKRDSEDDDEKVLHGWSSPDQKIERSESAPTDNFTNRKSAKKRKMTVESRKAGKASFAEREYDSDNSIEKKYNPQQRTYSRTKQAKYFDRDDAASEEDYSPVQRYGKPTATQAKYTESDEVSDDSIDDNSHMQQGRNFKIKEPKFIDSDVVSDDAMGYDSDSQLRRELSNKQIEDSERDEVSEDSMCGSFLKRRRKTCKSKPAKYVAKDAISDDQMEDHFQKQRRRIPKSRQDRYLDGEDIMVSDDQLEHRIHKQQRSKGRRAKHFTGDDITSDDQLEDRSGKFHRRIPKSRQDKCPVKEDVISDDQLEDHFQKPRGTIPKSRQNKRKNKIMADSSDNYAHLLHRTPKRKQVKSMDEEDINSDDQMEDSSLQQRRRTLRSQQSKLEAQQKMKQSNSCRVKQTSRPLKRSTQLQVKSKTSQKMKQPLRGQKNQPDKFRDFSMCSEEEEEGGPSTRLRKRVPKVEESEAKPKGKVIQRKKVNNATALKVSKTKDEEAEYECDIDGCTMSFSSKQELTVHKRNICPVKGCGKKFFSHKYLVQHRRVHEDDRPLRCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSTKKSR 1501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00304 1501 ProSiteProfiles Zinc finger C2H2 type domain profile. 1469 1500 IPR013087 -
Accr8g00304 1501 MobiDBLite consensus disorder prediction 972 987 - -
Accr8g00304 1501 MobiDBLite consensus disorder prediction 891 1031 - -
Accr8g00304 1501 ProSitePatterns Zinc finger C2H2 type domain signature. 1471 1495 IPR013087 -
Accr8g00304 1501 SMART JmjN_1 24 65 IPR003349 -
Accr8g00304 1501 MobiDBLite consensus disorder prediction 519 545 - -
Accr8g00304 1501 ProSiteProfiles JmjN domain profile. 25 66 IPR003349 -
Accr8g00304 1501 MobiDBLite consensus disorder prediction 1264 1316 - -
Accr8g00304 1501 MobiDBLite consensus disorder prediction 519 536 - -
Accr8g00304 1501 MobiDBLite consensus disorder prediction 1317 1360 - -
Accr8g00304 1501 MobiDBLite consensus disorder prediction 1006 1031 - -
Accr8g00304 1501 Pfam jmjN domain 26 59 IPR003349 -
Accr8g00304 1501 SMART c2h2final6 1409 1433 IPR013087 -
Accr8g00304 1501 SMART c2h2final6 1439 1463 IPR013087 -
Accr8g00304 1501 SMART c2h2final6 1386 1408 IPR013087 -
Accr8g00304 1501 SMART c2h2final6 1469 1495 IPR013087 -
Accr8g00304 1501 ProSitePatterns Zinc finger C2H2 type domain signature. 1411 1433 IPR013087 -
Accr8g00304 1501 FunFam Probable lysine-specific demethylase ELF6 18 369 - -
Accr8g00304 1501 Pfam JmjC domain, hydroxylase 229 347 IPR003347 -
Accr8g00304 1501 SUPERFAMILY Clavaminate synthase-like 211 379 - -
Accr8g00304 1501 MobiDBLite consensus disorder prediction 81 102 - -
Accr8g00304 1501 SUPERFAMILY beta-beta-alpha zinc fingers 1449 1493 IPR036236 -
Accr8g00304 1501 ProSiteProfiles Zinc finger C2H2 type domain profile. 1409 1438 IPR013087 -
Accr8g00304 1501 SUPERFAMILY beta-beta-alpha zinc fingers 1409 1445 IPR036236 -
Accr8g00304 1501 FunFam Probable lysine-specific demethylase ELF6 1466 1495 - -
Accr8g00304 1501 MobiDBLite consensus disorder prediction 938 959 - -
Accr8g00304 1501 MobiDBLite consensus disorder prediction 1105 1142 - -
Accr8g00304 1501 ProSitePatterns Zinc finger C2H2 type domain signature. 1441 1463 IPR013087 -
Accr8g00304 1501 ProSiteProfiles JmjC domain profile. 199 365 IPR003347 -
Accr8g00304 1501 MobiDBLite consensus disorder prediction 1151 1206 - -
Accr8g00304 1501 PANTHER LYSINE-SPECIFIC DEMETHYLASE 17 1435 - -
Accr8g00304 1501 MobiDBLite consensus disorder prediction 891 916 - -
Accr8g00304 1501 MobiDBLite consensus disorder prediction 1230 1248 - -
Accr8g00304 1501 Gene3D Classic Zinc Finger 1361 1408 - -
Accr8g00304 1501 Gene3D Cupin 18 369 - -
Accr8g00304 1501 SMART cupin_9 196 365 IPR003347 -
Accr8g00304 1501 MobiDBLite consensus disorder prediction 1105 1360 - -
Accr8g00304 1501 ProSiteProfiles Zinc finger C2H2 type domain profile. 1439 1468 IPR013087 -
Accr8g00304 1501 Gene3D Classic Zinc Finger 1409 1493 - -
Accr8g00304 1501 FunFam Probable lysine-specific demethylase ELF6 1436 1465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00304 Accr-Chr8 4268584 4278542 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00304 1045 1500 C2H2 Transcription Factor Family AT3G48430 36.308 1.16e-73 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr8g00304 JmjC 4.8e-35 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00304 - - gmx:100775813 1903.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00304 8 4268584 4278542 Accr8g00304 8 4268584 4278542 ECH