Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00300 ATGGCTTCAAGCGAGGGGTTTCTGACAGATGAGCAGAGGGAAATGCTAAAAAATGCCATCAATAATGTGGAAAATTTATCTTCATCTCCGAAATCTCCTACATCCTTTGTTGCTGACCATCAAATAAAAGCTCCTGCTGGTAGTAAGGCCCAAACTGCTGGGATTGCTGTGAGGCATGTGCGGCGTTCACATTCTGGAAAGTTTGTGCGGGTGAAGAAGGATGGCGCTGGTGGTAAGGGCACTTGGGGAAAATTGCTTGATACTGATGGTGAATCTCATATAGACAGGAAAGACCCAAATTATGATAGTGGTGAGGAACCATATCGGCTGGTGGGGTCTACTGTTACTGACCCCTTGGATGAATTCAAGAAGGCAGTTGTTTCCACCATCGAGGAATATTTCAGTACTAGTGATGTGGAGTTAGCTGCCTCTGATCTCAGAGAACTTGGTTCAAGTGAATATTATCCATACTTCATCAAGCGCCTTGTGTCTATGGCCATGGATAGGCATGATAAGGAGAAAGAAATGGCTTCTGTTTTGCTTTCTGCATTGTATGCTGATGTGATTAGTCCTGCACAGATTAGGGATGGATTTTTTATGCTTCTTGAATCTGCTGATGATCTTGCAGTGGACATACTGGATGCTGTTGACATCCTTGCTTTGTTTCTGGCTCGGGCTGTTGTTGACGATATCCTTCCTCCAGCCTTTCTTACCAGGGCAAAAAAGGCTCTTCCTGAGTCATCCAAGGGGGTTCAGGTTATCCAGACTGCAGAGAAGAGTTATCTCTCAGCTCCACATCATGCAGAGCTTGTAGAGAGGCGATGGGGTGGTAGCACACACATCACAGTTGAAGAAGTAAAGAAGAAGATTTCTGATTTATTAAAAGAATATGTTGGCAGTGGTGATACGGTTGAAGCTTGCAGGTGCATAAGGGAGTTGGGGGTTTCATTTTTTCATCATGAGGTTGTGAAGAGGGCTCTGGTGGTTGCCATGGAGAACCGCTCAGCAGAATCTTCAATGTTGAAATTATTAAGAGAAGCAGCAGAAGAAGGGCTTATTAGTTCCAGCCAAATGGTGAAAGGTTTTTCTCGGTTGGCAGAAGGCCTAGATGATCTTGCTCTTGATATTCCATCAGCCAAAACTTTGTTTCAATCATTGGTACCGAGGGCAATATCTGAAGGATGGCTTGACGCTTCATTTTTGAAACCCTCTGGTGAAGATGGGGATGTCCCAGTTGAGGATGAAAAAGTGAGGAACTACAAAAAGGAGGCAGTAACTATAATTCATGAGTATTTTCTCTCGGATGATATTCCTGAACTCATTCGGAGTCTTGAAGATCTTGGAGAGCCTGAGTTTAACCCAATATTTTTGAAGAAGCTAATTACTCTTGCCATGGACAGAAAAAACAGAGAAAAGGAAATGGCATCAGTACTACTATCTGCTCTCCATATTGAGATATTCTCCACAGAGGATATAGTTAATGGTTTTGTCATGCTTCTGGAAAGTGCTGAAGATACTGCACTGGATATATTGGACGCTTCAAATGAACTTGCCCTGTTTTTAGCTCGGGCTGTGATTGATGATGTGTTGGCCCCTCTGAATTTGGAGGAAATTGGCAGCGGGTTGCCACCTAAATGCAGTGGCAGTGAAACTGTGCGAATGGCGCGATCACTCATTGGGGCTCGTCATGCTGGTGAGAGGCTATTGAGATGTTGGGGTGGGGGTACTGGATGGGCTGTGGAGGATGCCAAGGACAAGATCATGAAGCTGCTGGAGGAGTATGAAAGTGGGGGTGTGGTGAGTGAAGCATGCCAGTGTATTCGTGATCTCGGAATGCCTTTCTTCAACCATGAGGTGGTGAAGAAAGCTTTGGTCATGGCCATGGAGAAGAAGAATGATAGGATGCTGGATCTGCTGCAGGAGTGCTTCAGTGAAGGTCTCATCACTATCAATCAGATGACTAAAGGCTTCACCCGCATCAAGGATGGTCTCGACGATCTGGCTCTGGACATTCCAAATGCACGAGAGAAATTCGCCTTCTATGTGGAGTATGCAACCAACAAGGGTTGGCTTCTAGCTTCATTTGATTCCCCAGATGCTTGA 2103 0.4508 MASSEGFLTDEQREMLKNAINNVENLSSSPKSPTSFVADHQIKAPAGSKAQTAGIAVRHVRRSHSGKFVRVKKDGAGGKGTWGKLLDTDGESHIDRKDPNYDSGEEPYRLVGSTVTDPLDEFKKAVVSTIEEYFSTSDVELAASDLRELGSSEYYPYFIKRLVSMAMDRHDKEKEMASVLLSALYADVISPAQIRDGFFMLLESADDLAVDILDAVDILALFLARAVVDDILPPAFLTRAKKALPESSKGVQVIQTAEKSYLSAPHHAELVERRWGGSTHITVEEVKKKISDLLKEYVGSGDTVEACRCIRELGVSFFHHEVVKRALVVAMENRSAESSMLKLLREAAEEGLISSSQMVKGFSRLAEGLDDLALDIPSAKTLFQSLVPRAISEGWLDASFLKPSGEDGDVPVEDEKVRNYKKEAVTIIHEYFLSDDIPELIRSLEDLGEPEFNPIFLKKLITLAMDRKNREKEMASVLLSALHIEIFSTEDIVNGFVMLLESAEDTALDILDASNELALFLARAVIDDVLAPLNLEEIGSGLPPKCSGSETVRMARSLIGARHAGERLLRCWGGGTGWAVEDAKDKIMKLLEEYESGGVVSEACQCIRDLGMPFFNHEVVKKALVMAMEKKNDRMLDLLQECFSEGLITINQMTKGFTRIKDGLDDLALDIPNAREKFAFYVEYATNKGWLLASFDSPDA 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00300 700 FunFam programmed cell death protein 4 409 563 - -
Accr8g00300 700 SUPERFAMILY ARM repeat 417 575 IPR016024 -
Accr8g00300 700 Gene3D - 411 562 - -
Accr8g00300 700 Gene3D - 114 262 - -
Accr8g00300 700 SUPERFAMILY ARM repeat 282 403 IPR016024 -
Accr8g00300 700 ProSiteProfiles MI domain profile. 121 242 IPR003891 -
Accr8g00300 700 ProSiteProfiles MI domain profile. 285 406 IPR003891 -
Accr8g00300 700 FunFam programmed cell death protein 4 113 264 - -
Accr8g00300 700 ProSiteProfiles MI domain profile. 419 540 IPR003891 -
Accr8g00300 700 MobiDBLite consensus disorder prediction 86 104 - -
Accr8g00300 700 Pfam MA3 domain 584 691 IPR003891 -
Accr8g00300 700 Pfam MA3 domain 122 233 IPR003891 -
Accr8g00300 700 Pfam MA3 domain 421 530 IPR003891 -
Accr8g00300 700 Pfam MA3 domain 286 397 IPR003891 -
Accr8g00300 700 PANTHER PROGRAMMED CELL DEATH 4 3 696 IPR039778 GO:0045892
Accr8g00300 700 SUPERFAMILY ARM repeat 119 279 IPR016024 -
Accr8g00300 700 Gene3D - 570 697 - -
Accr8g00300 700 Gene3D - 272 403 - -
Accr8g00300 700 SMART ma3_7 583 692 IPR003891 -
Accr8g00300 700 SMART ma3_7 286 397 IPR003891 -
Accr8g00300 700 SMART ma3_7 420 531 IPR003891 -
Accr8g00300 700 SMART ma3_7 122 233 IPR003891 -
Accr8g00300 700 MobiDBLite consensus disorder prediction 80 106 - -
Accr8g00300 700 FunFam Programmed cell death protein 4 271 406 - -
Accr8g00300 700 ProSiteProfiles MI domain profile. 582 700 IPR003891 -
Accr8g00300 700 SUPERFAMILY ARM repeat 579 695 IPR016024 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00300 586 682 Eukaryotic Initiation Factors Gene Family AT5G57870 32.000 4.26e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00300 - - gmx:100809081 1217.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00300 8 4243025 4246406 Accr8g00300 8 4243025 4246406 ECH