Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00290 ATGATGGATGGGAGGCGGCATTCAGTCGATGTTCCTATTTCGAAGACTCTAATAGCGTTGAGGAGAGTCAGGTCATTGAGGGATCCATCTACAAATTCAATGAGCAAACTCTGTTCTTCGATTGATAATCTACACTGGGAAAACGGTTCGGGCAATGGGATTTCCCTGCGGTTCTTGGACGCTTCTCGGGCTTGTGATTCTGATGATAATGGTGCACTAAGGTCAAAGAATTTAAGTTGTAGCATGCGCAGACAGCACGATGCTGCGGATTTTGAATTGAACAGTGGCCATTTCAACTCTAAACTGAAGTCTTGTCCTGAAGGGCAGCAGGATGAAGAACTAGCATACTCTAATTTGAATCAGGAAGGCAATTCCGGAATTAAGTCGACAGGTGATAGCTGCTATAGCAACCATGGACGCAAGGAATTAGATATAGCATCTATTATGCCTCCTAGCAACGAGGCAACTTCTGGATCGTCAAAGTTAGGGGCAATTGATCATTCTATGTTAACTAGAAAAACTCAATGCAAGAATCAAGTGAAATCATCCGAAGGTTTGGGCGATATTGCAGGTCTTAGAGGCAGTCCATGCCTTTCAGTCGGTGAAGCTTTCTCAGCTTACAGTTCTACGGCTAATATGAATCAAGATGTAGATATTGTAAATGATAATCACCATGGATGTGGAATAAGCTGCTGTTGGTCAAAATCACCAAGGTTTAGAGAATCAAATGTATATTCTGATATAGAAGACCGACCCCTGATAACCTGGCACGCAGATGAGACAGCTCTTTATGGACATAAAAACATGAGACACATTGGTGGTGAAATTAGTCCAAATTTTGAGACTCCTAGAAGTTTATGTATGAAATTCAGGCCAAAATTTTTTAATGATTTGGTTGGACAAAGTGTGGTAGCGAGGTCTCTGTTGGGTGCCATCTTTAAGGGAAGGGTAACCTCATTCTATCTTTTCCATGGTCCTCGTGGTACTGGCAAGACATCTGCATCTAGAATCTTCGCTTCTGCATTGAATTGTCTTTCCTTGGAGGAGGAAAGGCCATGTGGTCTGTGCAGAGAGTGTGTTTTATTCTTTTCTGGTAGAAGTAAAGATGTTAAAGAAGTTGATTCTGTGAGACTAAATCGTATTGACAAAGTAAAATCCCTTGTTAAGAATGCAAGCATCCCTCCAGTTTCTTCACGTTTTAAGATATTTATTGTTGACGAGTGCCAGTTGATCCTCGGGGAGACATGGGCATGTCTTTTGAATAGCCTAGAGAGCCTTTCTCATCATGTGGTTTTTATTATGATCACTCCAGACTTGGACAAACTTCCCCGGAGTGCAGTTTCCAGGGCCCAGAGATATCACTTCCCTAAGATAAAAGATGCTGAAATTGCAAGCACATTGGAAAAAATTTGCCTTGAAGAAGGTCTTGATTTTGAACAGGATGCTTTGGACTTCATCGCTGCTAAATCCTGTGGTTCACTTAGGGATGCAGAAATCATGCTTGATCAGCTGAGCTTGCTCGGTAAAAAAATCACAATTTCCTTAGCCCATGAGCTTACTGGCATCATTTCTGATGATGAATTGTTTGAATTACTGGATCTGGCTTTGTCCTCTGACACTTCAAATACTGTTAGAAGGGCACGAGAGTTAATGAGATCAAGGGTGGATCCTCTACAACTTATGTCGCAGCTAGCAAATCTCATTATGGACATTCTTGCAGGGAAATGTGATGATGGTGGTTCTGGAGTCAGAATGAGGTTTTCTAGTAGTCATAAATCTGAAGCAGACCTTCAAAAATTAAATCATGCATTGAGAATACTTTCTGAAACGGAGAAGCAATTACGAATTTCCAAGAACCAAACAACGTGGTTCACAGTAGCTCTTCTACAGTTAAGCTCTGCAGAACATTCTTCTGTCGATGCAAATGATACTAAATTAAGAGATGCATGCAATGGAGACGGTGATTTCTGCAGTACATCATCTACAGGGGATAGCAGGAAGCATCTTGCCTCTGCTCAGTATGATAACAAGTTGTTTAGATTAGGACCACTGGATCACACATTAAGTTCTATATGGTATAAAGCCACAGAGTCATGCCAATCTAACAGATTGAAGACTTTTCTTAGGAAACAGGGGAAGTTGTCTTCACTGTGTGTTAATCACGGTTTAGCAATTGCTGAGTTGGATTTCCAGCATCGCAGCTACGTATGTAGGGCTGAGAAGTCATGGAAAATGATTGCCAGTTCCCTGCAGCTTATATTGGGTTGTAACATAGAGCTCAGGATCAACCATGTACCTTGTACTTCTGATTCTAAATATGCCAAGTTGAAGAGGTCATCTTTCAGTTTTTTTAGTTGTTCCCGTAGAATTCGTCAAAAAGCACTATCAGATAATGAACAAGGAAGTGAACCAAACTACACTGATCACACCTCAGAAAAAGCTATGATGAGGGATAGAACTGTAACTTGTACATCTGATTGTGGATCTCAGATGCAAAAACCTGAGTCTTATCATCAAATGGAGGTTGTAACAGCATTGAGAGATGGTGATGGAAATTTGCTGAGCTCAAGGAAGAATTTGTTGAATAGTTCGTGTCAAGAGACTTCAAGGACCTCAAGTTCTGGGGTTGATTCCTCTAAGGAAGAGGGGTTTGATTATGCACACCTAGTTTCATCAAACCCTGATTCAGACTACCAAGCAAAATGTTTCCCTCGAAATTTCTGGATTCATAAAAAGAAGTTGCGTTCTCCAGATCTATCTCAGTTGGTTTTTGAGGGCACCCAGCAACAGAAAGAATTTGTTTTATCTATCCCAAATTATACCTGTTCAGAGACACATAGCTATGCTAGTGAACCATGTGTTTTCTCCACCAGCTCTAACAATTGTACCAAAGCCGCCCAAAACTAG 2907 0.4107 MMDGRRHSVDVPISKTLIALRRVRSLRDPSTNSMSKLCSSIDNLHWENGSGNGISLRFLDASRACDSDDNGALRSKNLSCSMRRQHDAADFELNSGHFNSKLKSCPEGQQDEELAYSNLNQEGNSGIKSTGDSCYSNHGRKELDIASIMPPSNEATSGSSKLGAIDHSMLTRKTQCKNQVKSSEGLGDIAGLRGSPCLSVGEAFSAYSSTANMNQDVDIVNDNHHGCGISCCWSKSPRFRESNVYSDIEDRPLITWHADETALYGHKNMRHIGGEISPNFETPRSLCMKFRPKFFNDLVGQSVVARSLLGAIFKGRVTSFYLFHGPRGTGKTSASRIFASALNCLSLEEERPCGLCRECVLFFSGRSKDVKEVDSVRLNRIDKVKSLVKNASIPPVSSRFKIFIVDECQLILGETWACLLNSLESLSHHVVFIMITPDLDKLPRSAVSRAQRYHFPKIKDAEIASTLEKICLEEGLDFEQDALDFIAAKSCGSLRDAEIMLDQLSLLGKKITISLAHELTGIISDDELFELLDLALSSDTSNTVRRARELMRSRVDPLQLMSQLANLIMDILAGKCDDGGSGVRMRFSSSHKSEADLQKLNHALRILSETEKQLRISKNQTTWFTVALLQLSSAEHSSVDANDTKLRDACNGDGDFCSTSSTGDSRKHLASAQYDNKLFRLGPLDHTLSSIWYKATESCQSNRLKTFLRKQGKLSSLCVNHGLAIAELDFQHRSYVCRAEKSWKMIASSLQLILGCNIELRINHVPCTSDSKYAKLKRSSFSFFSCSRRIRQKALSDNEQGSEPNYTDHTSEKAMMRDRTVTCTSDCGSQMQKPESYHQMEVVTALRDGDGNLLSSRKNLLNSSCQETSRTSSSGVDSSKEEGFDYAHLVSSNPDSDYQAKCFPRNFWIHKKKLRSPDLSQLVFEGTQQQKEFVLSIPNYTCSETHSYASEPCVFSTSSNNCTKAAQN 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00290 968 CDD HLD_clamp_pol_III_gamma_tau 458 521 IPR045085 -
Accr8g00290 968 Gene3D - 459 521 - -
Accr8g00290 968 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 288 507 IPR027417 -
Accr8g00290 968 MobiDBLite consensus disorder prediction 795 809 - -
Accr8g00290 968 Gene3D - 522 634 - -
Accr8g00290 968 MobiDBLite consensus disorder prediction 795 815 - -
Accr8g00290 968 Pfam DNA polymerase III, delta subunit 301 458 - -
Accr8g00290 968 NCBIfam DNA polymerase III subunit gamma/tau 285 631 IPR012763 GO:0003887|GO:0005524|GO:0006260|GO:0009360
Accr8g00290 968 Gene3D - 279 456 IPR027417 -
Accr8g00290 968 FunFam DNA polymerase III subunit gamma/tau 459 521 - -
Accr8g00290 968 SUPERFAMILY post-AAA+ oligomerization domain-like 527 631 IPR008921 GO:0003677|GO:0006260
Accr8g00290 968 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 286 691 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00290 Accr-Chr8 4197219 4200920 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00290 276 570 Core DNA Replication Machinery Family AT1G21690 23.411 3.97e-12 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00290 - - pcin:129308301 1690.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00290 8 4197219 4200920 Accr8g00290 8 4197219 4200920 ECH