Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00274 ATGGTTAACAAGAAGTTCAAAGAGGTTGTGGCTGCTAGGGGCAGGAGGGGAACGGGAAGGTTTGAGCAGGTTGAGCAGCTTACCTTCTTAACAAAAGTTGCCAAAACTCCAGCACAGAAGTTGGAAATATTTTTCAGTGTTGTTTCTGCTCAATTTGATGTTAATCCTGGTTTAAATGGGTATATGCCTATTAATGTGTGGAAGAAATGCGTGCAGAATATGATGGTCATTCTTGATATTCTAGTGCAGTACCCAAACATAGTTGTTGATGATACACTGGAGCCTGATGAGAATGAAACTCAGAAGGGTACTGACCATAGTGGACCAATTCGGGTATGGGGAAATTTAGTTGCATTCCTACAAAGAATTGATGCTGAATTTTTCAAGAGCTTGCAATGCATTGATCCTCATACTCGTGAATATGTTGAGAGACTTAGGGATGAGCCCACGTATCTGGCTCTTGCTCAGAATGTGCAGGATTATCTTGAAAGGGTTGGAGATTTTAAAGCTTCGTCAAAGGTAGCCCTTAAACGTGTTGAACTCATCTATTACAAACCACAGGAGGTTTACAATGCCATGAGGAAATTGGCTGAACTGACAGTTGACAACAATGGAGAGGTGGATGATGAGTCTAAAGGGTTTGAGGATACGAGGACTCCTACTGCATTTGTTGTAACTCCTGAGCTTGTTCCTCGAACACCTACTTTCCCAGAAAATAGTAGGACACTAATGGACTTATTGGTATCCCTGGTATACAAGTATGGGGATGAGCGGACAAAGGCGTGTGCTATGCTTTGTGATATATATCACCATGCTCTTCTGGATGAGTTCTCAACTGCCCGTGATCTTTTGCTCATGAGCCATTTGCAGGATAGTGTTCAGCTTATGGACATATCAACACAAATACTCTTTAACAGGGCCATGTCACAGCTAGGTCTTTGTGCTTTTCAGGTTGGGCTGATTTCTGAGGCTCACGGCTATCTCTCTGAATTATATTCTGGTGGAAGGGTGAAGGAGCTGCTTGCTCAAGGTGTCTCACAAAGTCGCTATCATGAGAAGACTCCAGAGCAGGAAAGGTCGGAAAGGAGACGACAGATGCCATATCATATGCACATTAACCTCGAGCTCCTGGAATCAGTGCATCTTATATGTGCTATGCTTTTGGAAGTTCCCAACATTGCAGCTAATGACCATGATGCAAAGCATAAAGTTATTAGTAAGACTTTCCGTCGCTTGCTTGAGGTCAGTGAGAAACAAACATTTACAGGTCCTCCTGAAAATGTCAGAGATCATCTTATGGCTGCCACAAGGGCCCTTAACAAGGGAGACTTCCATAAGAGTTATGATATTATCAAGTCGCTGGATGTCTGGAAATTTGTTAGAAATCATGACAGGGTTCTGGAAATGCTCAAGGAAAAGATCAAGGAGGAGGCTCTAAGGACTTGCCTCTTTACCTTCTCTTCATCTTATGACTCTTTGAGCCTTGAGCAACTCACAAAAATGTTTGACCTCTCTGCTCCTTGCATCCATAGCATAGTTAGTAGGATGATATTAAATGAGGAGCTGCATGCAAGCTTGGATGAACCATCTGCCCGCATTATTTTCCAGGATGTAAAGCACTCTAGATTGCATGCTATGGCATTCCAGTTTACGGAGAAGTTTTCTAGCATTGCAGAGAGTAATGAAAGAGCAATGGAGGCAAGGATAGGTGGCGGTGGACTTGATCTTCCCCTAAGGCGACGAGATAGCCAGGATTATGCTACCGCTGCTGCAACAACAGTTGGGGGTAGGTGGCAAGATTTGTCAACTACTCAGACAAGGCAAGGCAGCGGTACCGGACGAGCAGGATATAGTATTGGCGGTGGAAGGCCTTTTACGTTGAGCCAAAATAGCTACACAAGGGACCGAACAGGAAGAGGAGCAGGTGGAGGTTATCAGAGTACGAGATATCAAGACTCTGCATATGGTGGTTCGGGGAGGACAACTCAGGGTTCAGCACTCACGGGAGCCCAGGTGGATGCAGCAACTCGTATGGTCAGCCTTAAAGGAGTTTGTGCATAA 2061 0.4444 MVNKKFKEVVAARGRRGTGRFEQVEQLTFLTKVAKTPAQKLEIFFSVVSAQFDVNPGLNGYMPINVWKKCVQNMMVILDILVQYPNIVVDDTLEPDENETQKGTDHSGPIRVWGNLVAFLQRIDAEFFKSLQCIDPHTREYVERLRDEPTYLALAQNVQDYLERVGDFKASSKVALKRVELIYYKPQEVYNAMRKLAELTVDNNGEVDDESKGFEDTRTPTAFVVTPELVPRTPTFPENSRTLMDLLVSLVYKYGDERTKACAMLCDIYHHALLDEFSTARDLLLMSHLQDSVQLMDISTQILFNRAMSQLGLCAFQVGLISEAHGYLSELYSGGRVKELLAQGVSQSRYHEKTPEQERSERRRQMPYHMHINLELLESVHLICAMLLEVPNIAANDHDAKHKVISKTFRRLLEVSEKQTFTGPPENVRDHLMAATRALNKGDFHKSYDIIKSLDVWKFVRNHDRVLEMLKEKIKEEALRTCLFTFSSSYDSLSLEQLTKMFDLSAPCIHSIVSRMILNEELHASLDEPSARIIFQDVKHSRLHAMAFQFTEKFSSIAESNERAMEARIGGGGLDLPLRRRDSQDYATAAATTVGGRWQDLSTTQTRQGSGTGRAGYSIGGGRPFTLSQNSYTRDRTGRGAGGGYQSTRYQDSAYGGSGRTTQGSALTGAQVDAATRMVSLKGVCA 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00274 686 MobiDBLite consensus disorder prediction 644 665 - -
Accr8g00274 686 MobiDBLite consensus disorder prediction 625 665 - -
Accr8g00274 686 ProSiteProfiles PCI domain profile. 368 540 IPR000717 -
Accr8g00274 686 Pfam PCI domain 408 536 IPR000717 -
Accr8g00274 686 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 469 557 IPR000717 -
Accr8g00274 686 SUPERFAMILY "Winged helix" DNA-binding domain 464 540 IPR036390 -
Accr8g00274 686 PANTHER EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATED 1 681 IPR027516 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Accr8g00274 686 Pfam Eukaryotic translation initiation factor 3 subunit 8 N-terminus 1 400 IPR008905 GO:0003743|GO:0005852|GO:0006413|GO:0031369
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00274 Accr-Chr8 3952744 3955761 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00274 2 684 Eukaryotic Initiation Factors Gene Family AT3G56150 68.175 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00274 K03252 - gmx:100805203 1056.2