Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00242 ATGCCGCTGGAATCGTCTGAACAAGATGATGCTGATTCTGAGTTCGTGGAGATTGACCCCACTGGTCGATATGGTCGGTACAAGGAGGTTTTGGGGCGAGGTGCTTTCAAGAAAGTATATAGAGCATTTGATGAGTTGGAAGGAATTGAAGTAGCTTGGAATCAGGTTAATGTGGCAGATCTATTGCGTAATAATGAAGATTTGGAGCGCCTATATTCAGAGGTTCATTTGCTGAAGACTTTGAAGCATAAAAATATAATTAAATTTTACAATTCATGGGTTGATACAAAGAATGAGAACATCAACTTCATCACTGAAATTTTCACTTCTGGAACATTACGCCAATATCGGAAGAAACATAAGCATGTTGACTTGAGAGCATTGAAGAAATGGTCTAGACAGATTTTGGAGGGCCTTTCTTATCTTCACAGTCATGATCCACCAGTTATTCATCGAGATTTAAAGTGTGACAATATTTTTGTCAATGGAAATCATGGCGAGGTTAAAATTGGTGACTTGGGATTGGCTGCGATACTTCAGCAAGCCAATTCAGCTCATAGTGTTATAGGTACTCCGGAGTTCATGGCTCCAGAGCTTTATGAAGAAGAATACAATGAACTTGTTGACGTCTATGCTTTTGGTATGTGCTTGCTTGAGTTGGTGATGGTTGAGTATCCATATGCTGAATGTGCCAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAATCAAGCCAGCATCACTGGCAAAAGTGAAAGACCCTGGAGTTAAAGCATTTATAGAAAAGTGTATTGCAAATGTGACTGAGCGGTTGTCTGCAAAGGAACTCTTAATAGATCCCTTTCTTCTACCAGATGATGAAAGTGACAGTGTAGGTGGTTCTTTAAGGTCCAGAGCCCTTGATTTAGGACATAGTGACCATCATCTTACTGGTGATCATCCCAAAGAAACTTCTACAGGGTCTGACTGGGAATTCAGAGCAGAAGGTCAAAGGGGAGATGTCAATACTATATTTCTGAAACTGAGAATAGCAACCTCCTCAGGTAAGTTTCGCAAGATCCACTTCCCTTTTGATGTTCAAGAAGACACTGCAATTGCTGTCGCTAGTGAAATGGTTCAGGAGTTGGAACTCCCAGATCAAAATGTTACAACTATTGCTGGCATGATTGACTCAGAAATTCGATGCCTGATTCCAGACTGGAATCCTAATGGAACTCCTAATGCTGATAGTATTGGTCAAGAATTTGCAGTTTCAGGTGGTCATGACTCTGAAACTAGGAATGTGGTTTCTCTGCAGGAAAATGTTACTACAGCTTCTATTGATGATCTTTCACTAGAACGATTACCTTCAGGTCGTTACTATTGGTCTGAGACTGACTCACCCAAGGCAGGTAGAAACTCTCCATCAATGCCCGACGCTTCAAAATTATCATGTCAAGTGGATTCAAATGCTGCAGGAACCTCAACCGCATGTGGTGCTACTTCGACTGAGGGACAGGATGGCAACTGCAGTTGTGATGGTGATAGTTGTGGAGAGAAGAAATCTAGTAAGACTGTTGATTCCCTGTCCATTGAGAAAAGTATTACATCTGGGGATTTAAAGGCAACCAACGGAGAGTCTCCTTGGGTAGAAAGACCTATGGAATTGAAAGATGATAACTTAGAAGATGTCGACATAATTGCTGCAAAACTCAAGCAATTATTGGTAAAACATCGAGAGGAGGAAGATGAACTAAAGAGGAAGCATGGATTAGCTGTCTCAGATTTTCTGAAGGGACTACCTCTAGAAATTCAATATAAGGTCTTAAATATATGTAACCTGGAGGCCTCTGACAGTAGAAAGGTACCGTAA 1854 0.4094 MPLESSEQDDADSEFVEIDPTGRYGRYKEVLGRGAFKKVYRAFDELEGIEVAWNQVNVADLLRNNEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLSYLHSHDPPVIHRDLKCDNIFVNGNHGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDVYAFGMCLLELVMVEYPYAECANAAQIYKKVTSGIKPASLAKVKDPGVKAFIEKCIANVTERLSAKELLIDPFLLPDDESDSVGGSLRSRALDLGHSDHHLTGDHPKETSTGSDWEFRAEGQRGDVNTIFLKLRIATSSGKFRKIHFPFDVQEDTAIAVASEMVQELELPDQNVTTIAGMIDSEIRCLIPDWNPNGTPNADSIGQEFAVSGGHDSETRNVVSLQENVTTASIDDLSLERLPSGRYYWSETDSPKAGRNSPSMPDASKLSCQVDSNAAGTSTACGATSTEGQDGNCSCDGDSCGEKKSSKTVDSLSIEKSITSGDLKATNGESPWVERPMELKDDNLEDVDIIAAKLKQLLVKHREEEDELKRKHGLAVSDFLKGLPLEIQYKVLNICNLEASDSRKVP 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00242 617 Pfam Protein kinase domain 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00242 617 MobiDBLite consensus disorder prediction 461 476 - -
Accr8g00242 617 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Accr8g00242 617 ProSiteProfiles Protein kinase domain profile. 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00242 617 MobiDBLite consensus disorder prediction 488 517 - -
Accr8g00242 617 FunFam Probable serine/threonine-protein kinase WNK1 9 106 - -
Accr8g00242 617 Coils Coil 562 582 - -
Accr8g00242 617 Gene3D Phosphorylase Kinase; domain 1 8 106 - -
Accr8g00242 617 MobiDBLite consensus disorder prediction 455 476 - -
Accr8g00242 617 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 589 - -
Accr8g00242 617 FunFam probable serine/threonine-protein kinase WNK9 108 288 - -
Accr8g00242 617 Gene3D Transferase(Phosphotransferase) domain 1 108 287 - -
Accr8g00242 617 CDD STKc_WNK 23 283 - -
Accr8g00242 617 SUPERFAMILY Protein kinase-like (PK-like) 27 284 IPR011009 -
Accr8g00242 617 MobiDBLite consensus disorder prediction 488 504 - -
Accr8g00242 617 SMART serkin_6 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00242 Accr-Chr8 3152187 3155420 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00242 13 439 MAP Kinase Kinase Kinase AT3G22420 50.522 1.16e-158 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Accr8g00242 Pkinase 1.8e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00242 K08867 - vvi:100250110 740.339