Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00241 ATGCCGCTGGAATCGTCTGAACAAGATGATGCTGATTCTGAGTTCGTGGAGATTGACCCCACTGGTCGATATGGTCGGTACAAGGAGGTTTTGGGGCGAGGTGCTTTCAAGAAAGTATATAGAGCATTTGATGAGTTGGAAGGAATTGAAGTAGCTTGGAATCAGGTTAATGTGGCAGATCTATTGCGTAATAATGAAGATTTGGAGCGCCTATATTCAGAGGTTCATTTGCTGAAGACTTTGAAGCATAAAAATATAATTAAATTTTACAATTCATGGGTTGATACAAAGAATGAGAACATCAACTTCATCACTGAAATTTTCACTTCTGGAACATTACGCCAATATCGGAAGAAACATAAGCATGTTGACTTGAGAGCATTGAAGAAATGGTCTAGACAGATTTTGGAGGGCCTTTCTTATCTTCACAGTCATGATCCACCAGTTATTCATCGAGATTTAAAGTGTGACAATATTTTTGTCAATGGAAATCATGGCGAGGTTAAAATTGGTGACTTGGGATTGGCTGCGATACTTCAGCAAGCCAATTCAGCTCATAGTGTTATAGGTACTCCGGAGTTCATGGCTCCAGAGCTTTATGAAGAAGAATACAATGAACTTGTTGACGTCTATGCTTTTGGTATGTGCTTGCTTGAGTTGGTGATGGTTGAGTATCCATATGCTGAATGTGCCAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAATCAAGCCAGCATCACTGGCAAAAGTGAAAGACCCTGGAGTTAAAGCATTTATAGAAAAGTGTATTGCAAATGTGACTGAGCGGTTGTCTGCAAAGGAACTCTTAATAGATCCCTTTCTTCTACCAGATGATGAAAGTGACAGTGTAGGTGGTTCTTTAAGGTCCAGAGCCCTTGATTTAGGACATAGTGACCATCATCTTACTGGTGATCATCCCAAAGAAACTTCTACAGGGTCTGACTGGGAATTCAGAGCAGAAGGTCAAAGGGGAGATGTCAATACTATATTTCTGAAACTGAGAATAGCAACCTCCTCAGGTAAGTTTCGCAAGATCCACTTCCCTTTTGATGTTCAAGAAGACACTGCAATTGCTGTCGCTAGTGAAATGGTTCAGGAGTTGGAACTCCCAGATCAAAATGTTACAACTATTGCTGGCATGATTGACTCAGAAATTCGATGCCTGATTCCAGACTGGAATCCTAATGGAACTCCTAATGCTGATAGTATTGGTCAAGAATTTGCAGTTTCAGGTGGTCATGACTCTGAAACTAGGAATGTGGTTTCTCTGCAGGAAAATGTTACTACAGCTTCTATTGATGATCTTTCACTAGAACGATTACCTTCAGGTCGTTACTATTGGTCTGAGACTGACTCACCCAAGGCAGGAACCTCAACCGCATGTGGTGCTACTTCGACTGAGGGACAGGATGGCAACTGCAGTTGTGATGGTGATAGTTGTGGAGAGAAGAAATCTAGTAAGACTGTTGATTCCCTGTCCATTGAGAAAAGTATTACATCTGGGGATTTAAAGGCAACCAACGGAGAGTCTCCTTGGGTAGAAAGACCTATGGAATTGAAAGATGATAACTTAGAAGATGTCGACATAATTGCTGCAAAACTCAAGCAATTATTGGTAAAACATCGAGAGGAGGAAGATGAACTAAAGAGGAAGCATGGATTAGCTGTCTCAGATTTTCTGAAGGGACTACCTCTAGAAATTCAATATAAGGTCTTAAATATATGTAACCTGGAGGCCTCTGACAGTAGAAAGGTACCGTAA 1788 0.4088 MPLESSEQDDADSEFVEIDPTGRYGRYKEVLGRGAFKKVYRAFDELEGIEVAWNQVNVADLLRNNEDLERLYSEVHLLKTLKHKNIIKFYNSWVDTKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLSYLHSHDPPVIHRDLKCDNIFVNGNHGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEEYNELVDVYAFGMCLLELVMVEYPYAECANAAQIYKKVTSGIKPASLAKVKDPGVKAFIEKCIANVTERLSAKELLIDPFLLPDDESDSVGGSLRSRALDLGHSDHHLTGDHPKETSTGSDWEFRAEGQRGDVNTIFLKLRIATSSGKFRKIHFPFDVQEDTAIAVASEMVQELELPDQNVTTIAGMIDSEIRCLIPDWNPNGTPNADSIGQEFAVSGGHDSETRNVVSLQENVTTASIDDLSLERLPSGRYYWSETDSPKAGTSTACGATSTEGQDGNCSCDGDSCGEKKSSKTVDSLSIEKSITSGDLKATNGESPWVERPMELKDDNLEDVDIIAAKLKQLLVKHREEEDELKRKHGLAVSDFLKGLPLEIQYKVLNICNLEASDSRKVP 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00241 595 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Accr8g00241 595 ProSiteProfiles Protein kinase domain profile. 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00241 595 Gene3D - 336 431 - -
Accr8g00241 595 Gene3D Phosphorylase Kinase; domain 1 8 106 - -
Accr8g00241 595 FunFam probable serine/threonine-protein kinase WNK9 108 288 - -
Accr8g00241 595 SUPERFAMILY Protein kinase-like (PK-like) 27 297 IPR011009 -
Accr8g00241 595 Coils Coil 540 560 - -
Accr8g00241 595 Pfam Protein kinase domain 28 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00241 595 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 511 - -
Accr8g00241 595 FunFam Probable serine/threonine-protein kinase WNK1 9 106 - -
Accr8g00241 595 CDD STKc_WNK 23 283 - -
Accr8g00241 595 SMART serkin_6 25 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00241 595 Gene3D Transferase(Phosphotransferase) domain 1 108 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00241 Accr-Chr8 3152187 3155420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00241 13 439 MAP Kinase Kinase Kinase AT3G22420 50.522 1.22e-158 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Accr8g00241 Pkinase 1.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00241 K08867 - vvi:100250110 717.613