Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00230 ATGGATTCCAAACACTCACCCAAACTTAAATTCCTCTGCAGCTACGGCGGCAAGATTCTTCCCCGCTCCACCGACGGTGTCCTCCGTTACGTCGGCGGCTACACTAGAGTCCTCTCTGTTGATCCCTCCATTTCCTTCTCAGACCTTATGGTAAAGATTGTAGAGTTCTGTGGTTCGTCTGTGACCTTGAAATGTCCATTGCCAAACGGAGACCTCGAGACGTTGATCACCATTGCTAACGACGAGGATTTGGCCATTATTATTGAGGAATATAAACGGGCTTCGTCTTCTAAGGAAAATCCGTTGAAGATCCGAGCCGTTCTTTCGCCGCCCAGGTCTCTCAAGAAAGTATCTCCTCCTCCGTCTTCACGGTCGAGTGCCAACCTCTCTTCGACTGTATCGACTCGCTCCTCCACCGAATCGCTGCCGTATTCCCCTGCGTATGGTTATAGGGTTCCAGTCGCGTATCCGGCAGGGTTCCGTCACGGTTCGAGAAAAGCATGCCGCTATAACGGTCAATTCTATAGAAGGTCTCGATTCTTGAATGGTGGACCTAGCTGCCCCAATTTCTGCCACTGA 579 0.5078 MDSKHSPKLKFLCSYGGKILPRSTDGVLRYVGGYTRVLSVDPSISFSDLMVKIVEFCGSSVTLKCPLPNGDLETLITIANDEDLAIIIEEYKRASSSKENPLKIRAVLSPPRSLKKVSPPPSSRSSANLSSTVSTRSSTESLPYSPAYGYRVPVAYPAGFRHGSRKACRYNGQFYRRSRFLNGGPSCPNFCH 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00230 192 MobiDBLite consensus disorder prediction 111 142 - -
Accr8g00230 192 SUPERFAMILY CAD & PB1 domains 25 116 - -
Accr8g00230 192 Gene3D - 29 108 - -
Accr8g00230 192 PANTHER OS05G0427100 PROTEIN-RELATED 6 127 - -
Accr8g00230 192 SMART PB1_new 23 109 IPR000270 GO:0005515
Accr8g00230 192 CDD PB1_UP2 12 108 - -
Accr8g00230 192 Pfam PB1 domain 28 103 IPR000270 GO:0005515
Accr8g00230 192 MobiDBLite consensus disorder prediction 118 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00230 Accr-Chr8 3084300 3084981 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00230 1 108 MAP Kinase Kinase Kinase AT3G46920 40.367 2.58e-24 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00230 - - qsa:O6P43_022662 191.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00230 8 3084300 3084981 Accr12g00509 12 4714014 4714672 CCT
Accr8g00230 8 3084300 3084981 Accr8g00230 8 3084300 3084981 ECH