Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00229 ATGGCGACGGGTTCCGCCGCCATGGGGACGATCTTCTTCATCCTCATCATTCTCATCTCTCCCGTCTCTGCACTCGATTTCCTCTTCAATTCTTTCAACGGCACCATCAATGGCACCGGCCTTACTCTCATCAACGACGCTCGCGTCGACCACAACGTCATCAGAATGACCAACGACTCCAACCAGTACTCCTTCGGACGTTCTTTCTACCCCACCGCCATCGCCATGAAACGTAACTCTAATTCCTCCAACATTTCTTCGTTCTCCACTTCCTTCGTCTTCTCCATTTTGCCCCAGATCTCAACTAGCCCAGGTTTCGGTCTCGCCTTCGTTGTCACCAGTACCATGTCTCCGCCCGGCGCTCTCGCCAGTCAGTACTTTGGTCTCTTCACAAACGCCACACATCCCACCGTCGCTCCCCTGTTGGCCGTTGAATTCGATACGGGTCAGAACCCAGAGTTCAACGACCCAGATGATAACCACATCGGAATCGATCTGAACAACATTGAATCCATCCTCACGAAATCCGCTGGCTACTATAATTCCACCGGTGGTTTCGTGCCTATTCGAATGCGTAATGGTCGTAACGTTAGAGCTTGGATCGATTTTAATGGCGCAAATTTGGAGATAAATGTCACGGTGGCGCCAGTTGGCGTTGCTCGCCCATCTATGCCGACGCTTTCGTATAGAGATCCCGTTATAGCTAATTACGTATCTGCAGAGATGTATGTTGGATTTTCTGCGTCGAAAACGAATTGGGTTGAAGCACAGAGACTTCTAGCTTGGAGCTTCAGCGATATTGGACCTGCGAGAGACATTAATACGGCAAATTTGCCAGTATTTGAGCCAGAATCGTCGTCTTCGAAGCTTTCTGGTGGGGCGATTGCCGGGATCGTTATTGGATGCCTTGCTTTTATGATGATTTGTGGTTCTGGATTTTACCTGTGGTGGCGAAACAAGAAATTGAAAGAGCAAGAGGACGATATTGAAGATTGGGAGCTGGAGTATTGGCCCCACAGATTCTCATACGAGGAGCTCAGCGTGGCTACTGATGAATTTCGCAAGGAGAATCTCTTAGGTTCAGGAGGATTTGGAAGAGTGTACAAAGGAACACTATCGAACAACACTGAAATTGCAGTCAAATGCGTCAACCACGATTCCAAGCAAGGGTTACGAGAATTTATGGCGGAGATCTCGAGCATGGGCAGGCTTCAACACAAGAATCTAGTTCAAATGAGAGGATGGTGCAGAAAAGGGAACGAGCTCATGCTTGTCTACGACTATATGCCCAACGGAAGTCTGAATAAATGGATCTTCGACAAACCTGAGAAGCTTCTAGGCTGGGAACGACGTCGTCGAATCCTCGTCGACGTCGCCGAAGGGCTAAACTATCTACACCATGGTTGGGATCAAGTGGTGATACACAGAGACATTAAATCGAGCAACATATTGCTGGATTCTGAAATGAGGGGTAGATTGGGGGATTTTGGTCTCGCTAAGCTTTATCAACAGGGTGAGGTTCCAAATACGACGAGAGTGGTTGGTACGTTAGGGTATTTGGCACCTGAACTGGCATCGGTGGCTGCTCCGACGTCGGCGAGCGATTTGTACAGCTTCGGAGTGGTGTTGTTGGAAGTTGCGTGCGGGCGGAGACCGATTGAGACGTCAGCGCCGGAGGAGGAGGTGGTGCTGATTGATTGGGTGAGGGATTTGTATGCGAAAGGGAGTTTGGTTGAGGCGGCGGATTCAAGGATTAAGGGTGAGTATGACGAGGGAGACATGGAAATGATTTTGAAGCTTGGTTTAGCTTGTTGTCACCCTGATCCGCAGAGGAGGCCGACCATGAAGGAGGTCGTTGTGCTTTTGGTGGGCGAGGAACTCTCGGCGGCGCCGGTGGAATCGTTGTCTGAGTTGGCTCGCGGTGAGACCGGTACGGTCAATGGTGACGACGACTGTGAATCACCAGAGGCGGCGCTACGGGGGTCAACACAAGCGGTTTAA 2001 0.5027 MATGSAAMGTIFFILIILISPVSALDFLFNSFNGTINGTGLTLINDARVDHNVIRMTNDSNQYSFGRSFYPTAIAMKRNSNSSNISSFSTSFVFSILPQISTSPGFGLAFVVTSTMSPPGALASQYFGLFTNATHPTVAPLLAVEFDTGQNPEFNDPDDNHIGIDLNNIESILTKSAGYYNSTGGFVPIRMRNGRNVRAWIDFNGANLEINVTVAPVGVARPSMPTLSYRDPVIANYVSAEMYVGFSASKTNWVEAQRLLAWSFSDIGPARDINTANLPVFEPESSSSKLSGGAIAGIVIGCLAFMMICGSGFYLWWRNKKLKEQEDDIEDWELEYWPHRFSYEELSVATDEFRKENLLGSGGFGRVYKGTLSNNTEIAVKCVNHDSKQGLREFMAEISSMGRLQHKNLVQMRGWCRKGNELMLVYDYMPNGSLNKWIFDKPEKLLGWERRRRILVDVAEGLNYLHHGWDQVVIHRDIKSSNILLDSEMRGRLGDFGLAKLYQQGEVPNTTRVVGTLGYLAPELASVAAPTSASDLYSFGVVLLEVACGRRPIETSAPEEEVVLIDWVRDLYAKGSLVEAADSRIKGEYDEGDMEMILKLGLACCHPDPQRRPTMKEVVVLLVGEELSAAPVESLSELARGETGTVNGDDDCESPEAALRGSTQAV 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00229 666 FunFam L-type lectin-domain containing receptor kinase S.1 338 428 - -
Accr8g00229 666 CDD TM_EGFR-like 291 325 - -
Accr8g00229 666 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Accr8g00229 666 Pfam Legume lectin domain 25 278 IPR001220 GO:0030246
Accr8g00229 666 PANTHER - 54 626 - -
Accr8g00229 666 MobiDBLite consensus disorder prediction 641 666 - -
Accr8g00229 666 ProSitePatterns Legume lectins beta-chain signature. 142 148 IPR019825 -
Accr8g00229 666 CDD lectin_legume_LecRK_Arcelin_ConA 25 265 IPR001220 GO:0030246
Accr8g00229 666 FunFam L-type lectin-domain containing receptor kinase S.4 429 634 - -
Accr8g00229 666 Gene3D Phosphorylase Kinase; domain 1 323 428 - -
Accr8g00229 666 SUPERFAMILY Protein kinase-like (PK-like) 329 622 IPR011009 -
Accr8g00229 666 Pfam Protein kinase domain 354 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00229 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Accr8g00229 666 ProSiteProfiles Protein kinase domain profile. 353 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00229 666 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 280 IPR013320 -
Accr8g00229 666 Gene3D - 23 278 - -
Accr8g00229 666 CDD STKc_IRAK 359 619 - -
Accr8g00229 666 FunFam L-type lectin-domain containing receptor kinase S.4 23 272 - -
Accr8g00229 666 Gene3D Transferase(Phosphotransferase) domain 1 429 632 - -
Accr8g00229 666 SMART serkin_6 353 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00229 Accr-Chr8 3059200 3061200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00229 20 624 Receptor kinase-like Gene Family AT1G15530 69.622 0.0 830
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Accr8g00229 Pkinase 5.3e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00229 - - pcin:129309359 1194.1