Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00219 ATGGGTCGCCATTCCTGTTGTGTAAAGCAAAAACTGAGAAAGGGTCTGTGGTCCCCTGAAGAAGATGAGAAGCTCTTCAATTACATTACCACATATGGCGTTGGCTGCTGGAGTTCTGTTCCCAAACTCGCTGGGTTGCAAAGATGTGGGAAGAGTTGCAGATTGAGATGGATTAATTACCTGAGGCCTGATTTGAAGAGAGGAATGTTTTCTCAGCAAGAAGAAGATCTCATAATCAGCCTCCATGAAGTTCTTGGCAACAGGTGGGCTCAGATTGCAGCACAGTTACCAGGAAGAACAGATAATGAGATAAAGAATTTCTGGAATTCAAGTCTGAAGAAGAAGCTTCTGAAGCAAGGGATTGACCCAACCACACACAAACCTTTGAATATTGTTACAGAACCTCAATATCATCATCATCAATCATCAATAATGAAGGAGGAGGAAAAAACTGTTCTCAATAGAGATTCTTCAGAGACACTTGTATTGCCATCTTCTATACAGATTCCATTCTCAGTCTCATCATCATCACAAGGATCATCATCTCTCGCTGCAGGAAGTGATTCCAATAATAACCAGTTTGATCAGAATAATAATAATGGTTATGACCCATTGGCGTTATTTGAGTCGTCCTTGTGTCGAATGAGTGGTTTAAACCAATTATCTTCTGGGTTTGGATTCAACATGTCCTCAATAATGCCAGGTCTGATCACTAACTCCACCATGACGGAGTTATCATCGGAAAATAAGTCGGGTTGGGGGATCAGTTCAAGCAATAGCTTGAGCAGCTATGTTCAACCAGGAGGGTGTCAGATAAGTAATAATAACAGCTTAATGGTGGATCCATTATTGTATCAGTTTCAATTTAATGGTGATGTAAAGAACGAAGAAGATTATTATCAGATGATGAAGACGGCGACGGTGGCGGCCGCAGCAGGGTTGTCGTCGTGGGAAGAAGATGGCGGTGGCCAGATTCTGAATCAAAGCTCTATAGATTTCACCGCCACATATCCGTTAACGTCACTGTCAGAAGATCTGTCGCCCGCGAATTTTGATGCTTTCAACCATATGTGA 1074 0.4218 MGRHSCCVKQKLRKGLWSPEEDEKLFNYITTYGVGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRGMFSQQEEDLIISLHEVLGNRWAQIAAQLPGRTDNEIKNFWNSSLKKKLLKQGIDPTTHKPLNIVTEPQYHHHQSSIMKEEEKTVLNRDSSETLVLPSSIQIPFSVSSSSQGSSSLAAGSDSNNNQFDQNNNNGYDPLALFESSLCRMSGLNQLSSGFGFNMSSIMPGLITNSTMTELSSENKSGWGISSSNSLSSYVQPGGCQISNNNSLMVDPLLYQFQFNGDVKNEEDYYQMMKTATVAAAAGLSSWEEDGGGQILNQSSIDFTATYPLTSLSEDLSPANFDAFNHM 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00219 357 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr8g00219 357 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Accr8g00219 357 Gene3D - 11 67 - -
Accr8g00219 357 Gene3D - 69 151 - -
Accr8g00219 357 SMART sant 66 114 IPR001005 -
Accr8g00219 357 SMART sant 13 63 IPR001005 -
Accr8g00219 357 FunFam Myb transcription factor 11 67 - -
Accr8g00219 357 CDD SANT 70 112 IPR001005 -
Accr8g00219 357 CDD SANT 17 61 IPR001005 -
Accr8g00219 357 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr8g00219 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Accr8g00219 357 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr8g00219 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Accr8g00219 357 PANTHER MYB DOMAIN PROTEIN 55 1 274 - -
Accr8g00219 357 FunFam Transcription factor MYB86 69 136 - -
Accr8g00219 357 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00219 Accr-Chr8 3000586 3001931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00219 1 129 MYB Transcription Factor Family AT1G57560 82.171 3.76e-79 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr8g00219 Myb_DNA-binding 7.8e-14 CL0123