Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00203 ATGCCTGAAAATCCATGGACGACCCTCCTCTTCTTATTCCAAGTAACTGCACTTTTACTTCATTCCCAACATTCTTTTGTTGCTTCTGCTGTTAACCCACAAGGGCAAGCTCTTCTTTCATGGAAGACAACATCTCTAAACGGGTCCTTGGAGGTGCTGGGTAATTGGGACCCGATTGATGAAACTCCATGTGGCTGGTTTGGAGTTAGCTGCAACTTCAAGAACGAGGTTGTGCAATTAGATCTGAGGGATGTTGATTTGCTTGGAAGTGTTCCTTCTAATTTCACCTCATTGAGTTCCTTGACCAAGCTTATCCTTATTGGAACGAACCTTACTGGTTCTATCCCAAAGGAGATAGGGTCTCTTAGCAATCTCACCTACTTGGATTTGAGTGACAATGCTTTGACTGGTGAGATCCCAAGTGAGCTTTTGTTTTTGCCTGAGCTTCAACAACTTCATCTTAACTCAAACCAGCTTGAAGGGTCGATTCCAATTTCAATTGGGAATCTCACAAAGTTGGAGTGGCTGACCTTGTATGATAATCAGCTAAGTGGTCAAATTCCCAGAACGATTGGCAATCTGAAGAATCTGCAAGTGATTCGAGCTGGTGGAAACAAGAATCTTGAAGGTGCTTTGCCTCAAGAAATAGGAAATTGTACCAAATTGGTTATGTTGGGTTTAGCTGAAACAAGTCTCTCAGGATTTCTTCCTCCAACTCTTGGCCTCCTCAAGAAGCTCAACACTATTGCAATTTACACTTCTCTTCTCTCTGGCCAGATTCCTCCTGAACTTGGTGATTGCACTGAACTCGAGAACATTTATTTGTACGAGAATTCCCTCACTGGATCATTGCCTAGCAGATTGGGAAATCTTAGGAATCTTAAGAATCTTCTTTTATGGCAGAACAATTTAGTTGGCACAATCCCACCAGAAATCGGAAATTGCTACCAGTTATCTGTTATTGACATCTCGATGAACTCGCTTACAGGAAGCATTCCCAAGAGTCTTGGAAATTTGACGGCTCTGGAAGAACTTCAACTCAGTGAAAACCAGATTTCAGGGGAGATTCCTACAGAGCTAGGGAACTGCGAGCAACTCACTCACATCGAGCTGGATAACAATCAAATCACGGGGACGATACCTTCTGAATTTGGGAACCTTAGTAATCTGACTTTGTTGTTCCTGTGGCATAACAATCTCGAAGGAAATATACCATCTGCACTTTCCAATTGCCAAAACCTCGAGGCTGTGGATCTGTCACAGAATGCACTGACGGGTCCCATACCAAAGGGGATATTCGAGCTCAAGAATCTCAACAAGCTTTTGCTGCTTTCTAATAATCTCTCCGGAGATATTCCATCTGATATTGGGAATTGTTCGTCTTTGATTCGGTTCCGAGTGAGCAAAAACAAGATCACAGGGAGTATTCCCCCGCAGATTGGGAATCTGAGGAACTTAAACTTTTTGGATCTTGGATTCAATCGGATTTCTGGAGTCATTCCGGAAGAGATGTCAGGCTGCAGGAATCTCACGTTCTTGGACCTACATTCCAATATGATCGCTGGGAGCTTGCCGGAGAGTCTAAGTGAGCTTGTCTCGCTTCAATTCATCGACTTCTCTGATAACATGATCGAAGGTACACTGAACCCGAGATTAGGATCGCTTGGTTCACTAACAAAACTGATTCTCGGAAAGAATCATATCTCTGGATCAATTCCAAGTCAACTCGGTTCCTGTTCGAAGCTTCAGTTGCTGGATCTTAGTAGCAACAATTTCTCCGGCAATATCCCCGGTAGTCTTGGTAATATACCGGGGCTTGAAATCGCACTGAATCTGAGCTTGAATAAACTTTCCGGCGAGATTCCTCAGGAGTTTTCAGGCTTGGTTAAGCTGGGGATCTTAGACATTTCCCACAACGAGCTCACCGGCAACCTTCATTACCTCGCGGATCTCCAAAATCTCGTCGTCCTCAATATCTCCTACAACAAATTCTCTGGACGCATCCCGGAAACGCCGTTCTTCGCAAAGCTTCCTATAAGTATGCTCGCCGGCAACCCGTCGCTATGCCTATCCGGAAACCGATGCGCCGAAGACGATTCTGGAAGTCGTTCAGGCAGGCGAGCGAAGACGGCGCGTATAGCAATGGTGGTCCTTCTTTGCACAGCATGTGCTCTGCTCTTGGCGGCGCTGTACGTCGTCGTGGCAGCAAAACGACGACAGAGGGACCACGGTAACGATCTCGATCTCGACGGGAGGGAAAGTGACATGGAGATGGGCCCACCATGGGAAGTGACAGTGTACCAGAAGCTCGACTTGTCAATTTCCGATGTGGCAAAGTGTCTCACGGCCGGGAACGTCATTGGGCGCGGACGATCCGGCGTCGTTTACAGAGTGAACATGGCAGCGGGATTAGAAATGGCCGTGAAGAGGCTCCGGTCGTCGGATAAATTCTCGGCGGTGGCGTTCTCGTCGGAGATAACGACGTTGGCGAGAATACGACACCGTAATATCGTGAGGCTATTGGGTTGGGCGGCGAACCGGAAGACGAAGTTACTGTTTTATGATTATTTACCGAACGGTAATCTGGATACGCTGTTACACGAGGGGTGCACAGGATTAATCGAGTGGGAGATACGGTTCAAGATAGCACTAGGAGTGGCGGAAGGCTTAGCTTACCTGCATCATGACTGTGTGCCTGCTATCTTGCACCGGGACGTAAAAGCGCAGAACATTTTGTTAGGAGATGGTTACGAGCCGTGTCTCGCAGATTTTGGTTTTGCCAGATTGGTTCAGGATGACCAAGCTTCCTTCTCGGTGAATCCACAGTTCGCTGGTTCTTACGGCTACATTGCGCCGGAGTATGGGTGTATGCTGAAGATAACAGAGAAGAGCGATGTGTATAGCTACGGAGTGGTTCTATTAGAGATAATAACAGGAAAACGACCAGTGGACGCGTCGTTTGGTGAGGGTCTACATGTGATAGACTGGGTGAGAGACCACCTGAAGAAAAAGAAGGACCCTGTGGAGATTGTCGATCCAAAGCTTCAAGGCCACACAGACACACACATACAAGAGATGATTCAAACTCTCGGAATCTCCCTCCTCTGTACCAGCACTCGCCCCGATGATCGTCCCACCATGAAAGACGTCGCCGCCTTGCTCCGAGAGATCCGACACGATCCTCCCGTGGGCCACGAGGCCCACAAGCCCAAGCCCAAGCCCACCATTAACTCCTCCTCCTCCTCCTCTGTTACTCAAGCCCAGCTGTTGCTTCTTGATCAACCTTCGTCTCATTCTTCTTCGCTTGCTTATTCGTCTTCTACTCTACAAGGAAGGAGCGCGTGA 3345 0.4747 MPENPWTTLLFLFQVTALLLHSQHSFVASAVNPQGQALLSWKTTSLNGSLEVLGNWDPIDETPCGWFGVSCNFKNEVVQLDLRDVDLLGSVPSNFTSLSSLTKLILIGTNLTGSIPKEIGSLSNLTYLDLSDNALTGEIPSELLFLPELQQLHLNSNQLEGSIPISIGNLTKLEWLTLYDNQLSGQIPRTIGNLKNLQVIRAGGNKNLEGALPQEIGNCTKLVMLGLAETSLSGFLPPTLGLLKKLNTIAIYTSLLSGQIPPELGDCTELENIYLYENSLTGSLPSRLGNLRNLKNLLLWQNNLVGTIPPEIGNCYQLSVIDISMNSLTGSIPKSLGNLTALEELQLSENQISGEIPTELGNCEQLTHIELDNNQITGTIPSEFGNLSNLTLLFLWHNNLEGNIPSALSNCQNLEAVDLSQNALTGPIPKGIFELKNLNKLLLLSNNLSGDIPSDIGNCSSLIRFRVSKNKITGSIPPQIGNLRNLNFLDLGFNRISGVIPEEMSGCRNLTFLDLHSNMIAGSLPESLSELVSLQFIDFSDNMIEGTLNPRLGSLGSLTKLILGKNHISGSIPSQLGSCSKLQLLDLSSNNFSGNIPGSLGNIPGLEIALNLSLNKLSGEIPQEFSGLVKLGILDISHNELTGNLHYLADLQNLVVLNISYNKFSGRIPETPFFAKLPISMLAGNPSLCLSGNRCAEDDSGSRSGRRAKTARIAMVVLLCTACALLLAALYVVVAAKRRQRDHGNDLDLDGRESDMEMGPPWEVTVYQKLDLSISDVAKCLTAGNVIGRGRSGVVYRVNMAAGLEMAVKRLRSSDKFSAVAFSSEITTLARIRHRNIVRLLGWAANRKTKLLFYDYLPNGNLDTLLHEGCTGLIEWEIRFKIALGVAEGLAYLHHDCVPAILHRDVKAQNILLGDGYEPCLADFGFARLVQDDQASFSVNPQFAGSYGYIAPEYGCMLKITEKSDVYSYGVVLLEIITGKRPVDASFGEGLHVIDWVRDHLKKKKDPVEIVDPKLQGHTDTHIQEMIQTLGISLLCTSTRPDDRPTMKDVAALLREIRHDPPVGHEAHKPKPKPTINSSSSSSVTQAQLLLLDQPSSHSSSLAYSSSTLQGRSA 1114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00203 1114 Gene3D Phosphorylase Kinase; domain 1 763 856 - -
Accr8g00203 1114 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 31 205 - -
Accr8g00203 1114 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 857 1071 - -
Accr8g00203 1114 ProSiteProfiles Protein kinase domain profile. 781 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00203 1114 FunFam Putative LRR receptor-like serine/threonine-protein kinase 610 694 - -
Accr8g00203 1114 SMART LRR_sd22_2 339 365 - -
Accr8g00203 1114 SMART LRR_sd22_2 122 145 - -
Accr8g00203 1114 SMART LRR_sd22_2 507 530 - -
Accr8g00203 1114 SMART LRR_sd22_2 531 567 - -
Accr8g00203 1114 SMART LRR_sd22_2 387 416 - -
Accr8g00203 1114 SMART LRR_sd22_2 628 653 - -
Accr8g00203 1114 SMART LRR_sd22_2 170 196 - -
Accr8g00203 1114 SMART LRR_sd22_2 483 506 - -
Accr8g00203 1114 SMART LRR_sd22_2 267 293 - -
Accr8g00203 1114 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Accr8g00203 1114 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 206 429 - -
Accr8g00203 1114 ProSitePatterns Serine/Threonine protein kinases active-site signature. 901 913 IPR008271 GO:0004672|GO:0006468
Accr8g00203 1114 SMART serkin_6 781 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00203 1114 SUPERFAMILY L domain-like 380 691 - -
Accr8g00203 1114 Pfam Leucine Rich repeat 123 138 IPR001611 GO:0005515
Accr8g00203 1114 SUPERFAMILY Protein kinase-like (PK-like) 768 1056 IPR011009 -
Accr8g00203 1114 Gene3D Ribonuclease Inhibitor 432 522 IPR032675 -
Accr8g00203 1114 Gene3D Ribonuclease Inhibitor 523 608 IPR032675 -
Accr8g00203 1114 Gene3D Ribonuclease Inhibitor 609 695 IPR032675 -
Accr8g00203 1114 Gene3D Transferase(Phosphotransferase) domain 1 857 1071 - -
Accr8g00203 1114 ProSitePatterns Protein kinases ATP-binding region signature. 787 809 IPR017441 GO:0005524
Accr8g00203 1114 Pfam Protein kinase domain 784 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00203 1114 MobiDBLite consensus disorder prediction 1059 1114 - -
Accr8g00203 1114 MobiDBLite consensus disorder prediction 1073 1114 - -
Accr8g00203 1114 FunFam Leucine-rich repeat receptor protein kinase EMS1 525 609 - -
Accr8g00203 1114 Pfam Leucine rich repeat 147 206 IPR001611 GO:0005515
Accr8g00203 1114 Pfam Leucine rich repeat 292 352 IPR001611 GO:0005515
Accr8g00203 1114 Pfam Leucine rich repeat 365 424 IPR001611 GO:0005515
Accr8g00203 1114 Pfam Leucine rich repeat 464 520 IPR001611 GO:0005515
Accr8g00203 1114 SMART LRR_typ_2 122 146 IPR003591 -
Accr8g00203 1114 SMART LRR_typ_2 555 579 IPR003591 -
Accr8g00203 1114 SMART LRR_typ_2 483 507 IPR003591 -
Accr8g00203 1114 SMART LRR_typ_2 339 363 IPR003591 -
Accr8g00203 1114 SMART LRR_typ_2 387 411 IPR003591 -
Accr8g00203 1114 SMART LRR_typ_2 435 459 IPR003591 -
Accr8g00203 1114 SMART LRR_typ_2 291 315 IPR003591 -
Accr8g00203 1114 SMART LRR_typ_2 170 194 IPR003591 -
Accr8g00203 1114 SMART LRR_typ_2 508 531 IPR003591 -
Accr8g00203 1114 SMART LRR_typ_2 651 675 IPR003591 -
Accr8g00203 1114 Gene3D Ribonuclease Inhibitor 287 366 IPR032675 -
Accr8g00203 1114 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 328 1049 - -
Accr8g00203 1114 SUPERFAMILY RNI-like 80 401 - -
Accr8g00203 1114 Gene3D Ribonuclease Inhibitor 186 286 IPR032675 -
Accr8g00203 1114 Gene3D Ribonuclease Inhibitor 31 185 IPR032675 -
Accr8g00203 1114 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 430 524 - -
Accr8g00203 1114 Gene3D Ribonuclease Inhibitor 367 431 IPR032675 -
Accr8g00203 1114 ProSiteProfiles Leucine-rich repeat profile. 124 147 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00203 Accr-Chr8 2775638 2780080 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00203 30 1074 Receptor kinase-like Gene Family AT5G56040 54.237 0.0 1108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr8g00203 Pkinase 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00203 - - gmx:100778064 1642.86