Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00202 ATGGTAGTAGTTGTTGTAATGCCTGAAAATCCATGGACGACCCTCCTCTTCTTATTCCAAGTAACTGCACTTTTACTTCATTCCCAACATTCTTTTGTTGCTTCTGCTGTTAACCCACAAGGGCAAGCTCTTCTTTCATGGAAGACAACATCTCTAAACGGGTCCTTGGAGGTGCTGGGTAATTGGGACCCGATTGATGAAACTCCATGTGGCTGGTTTGGAGTTAGCTGCAACTTCAAGAACGAGGTTGTGCAATTAGATCTGAGGGATGTTGATTTGCTTGGAAGTGTTCCTTCTAATTTCACCTCATTGAGTTCCTTGACCAAGCTTATCCTTATTGGAACGAACCTTACTGGTTCTATCCCAAAGGAGATAGGGTCTCTTAGCAATCTCACCTACTTGGATTTGAGTGACAATGCTTTGACTGGTGAGATCCCAAGTGAGCTTTTGTTTTTGCCTGAGCTTCAACAACTTCATCTTAACTCAAACCAGCTTGAAGGGTCGATTCCAATTTCAATTGGGAATCTCACAAAGTTGGAGTGGCTGACCTTGTATGATAATCAGCTAAGTGGTCAAATTCCCAGAACGATTGGCAATCTGAAGAATCTGCAAGTGATTCGAGCTGGTGGAAACAAGAATCTTGAAGGTGCTTTGCCTCAAGAAATAGGAAATTGTACCAAATTGGTTATGTTGGGTTTAGCTGAAACAAGTCTCTCAGGATTTCTTCCTCCAACTCTTGGCCTCCTCAAGAAGCTCAACACTATTGCAATTTACACTTCTCTTCTCTCTGGCCAGATTCCTCCTGAACTTGGTGATTGCACTGAACTCGAGAACATTTATTTGTACGAGAATTCCCTCACTGGATCATTGCCTAGCAGATTGGGAAATCTTAGGAATCTTAAGAATCTTCTTTTATGGCAGAACAATTTAGTTGGCACAATCCCACCAGAAATCGGAAATTGCTACCAGTTATCTGTTATTGACATCTCGATGAACTCGCTTACAGGAAGCATTCCCAAGAGTCTTGGAAATTTGACGGCTCTGGAAGAACTTCAACTCAGTGAAAACCAGATTTCAGGGGAGATTCCTACAGAGCTAGGGAACTGCGAGCAACTCACTCACATCGAGCTGGATAACAATCAAATCACGGGGACGATACCTTCTGAATTTGGGAACCTTAGTAATCTGACTTTGTTGTTCCTGTGGCATAACAATCTCGAAGGAAATATACCATCTGCACTTTCCAATTGCCAAAACCTCGAGGCTGTGGATCTGTCACAGAATGCACTGACGGGTCCCATACCAAAGGGGATATTCGAGCTCAAGAATCTCAACAAGCTTTTGCTGCTTTCTAATAATCTCTCCGGAGATATTCCATCTGATATTGGGAATTGTTCGTCTTTGATTCGGTTCCGAGTGAGCAAAAACAAGATCACAGGGAGTATTCCCCCGCAGATTGGGAATCTGAGGAACTTAAACTTTTTGGATCTTGGATTCAATCGGATTTCTGGAGTCATTCCGGAAGAGATGTCAGGCTGCAGGAATCTCACGTTCTTGGACCTACATTCCAATATGATCGCTGGGAGCTTGCCGGAGAGTCTAAGTGAGCTTGTCTCGCTTCAATTCATCGACTTCTCTGATAACATGATCGAAGGTACACTGAACCCGAGATTAGGATCGCTTGGTTCACTAACAAAACTGATTCTCGGAAAGAATCATATCTCTGGATCAATTCCAAGTCAACTCGGTTCCTGTTCGAAGCTTCAGTTGCTGGATCTTAGTAGCAACAATTTCTCCGGCAATATCCCCGGTAGTCTTGGTAATATACCGGGGCTTGAAATCGCACTGAATCTGAGCTTGAATAAACTTTCCGGCGAGATTCCTCAGGAGTTTTCAGGCTTGGTTAAGCTGGGGATCTTAGACATTTCCCACAACGAGCTCACCGGCAACCTTCATTACCTCGCGGATCTCCAAAATCTCGTCGTCCTCAATATCTCCTACAACAAATTCTCTGGACGCATCCCGGAAACGCCGTTCTTCGCAAAGCTTCCTATAAGTATGCTCGCCGGCAACCCGTCGCTATGCCTATCCGGAAACCGATGCGCCGAAGACGATTCTGGAAGTCGTTCAGGCAGGCGAGCGAAGACGGCGCGTATAGCAATGGTGGTCCTTCTTTGCACAGCATGTGCTCTGCTCTTGGCGGCGCTGTACGTCGTCGTGGCAGCAAAACGACGACAGAGGGACCACGGTAACGATCTCGATCTCGACGGGAGGGAAAGTGACATGGAGATGGGCCCACCATGGGAAGTGACAGTGTACCAGAAGCTCGACTTGTCAATTTCCGATGTGGCAAAGTGTCTCACGGCCGGGAACGTCATTGGGCGCGGACGATCCGGCGTCGTTTACAGAGTGAACATGGCAGCGGGATTAGAAATGGCCGTGAAGAGGCTCCGGTCGTCGGATAAATTCTCGGCGGTGGCGTTCTCGTCGGAGATAACGACGTTGGCGAGAATACGACACCGTAATATCGTGAGGCTATTGGGTTGGGCGGCGAACCGGAAGACGAAGTTACTGTTTTATGATTATTTACCGAACGGTAATCTGGATACGCTGTTACACGAGGGGTGCACAGGATTAATCGAGTGGGAGATACGGTTCAAGATAGCACTAGGAGTGGCGGAAGGCTTAGCTTACCTGCATCATGACTGTGTGCCTGCTATCTTGCACCGGGACGTAAAAGCGCAGAACATTTTGTTAGGAGATGGTTACGAGCCGTGTCTCGCAGATTTTGGTTTTGCCAGATTGGTTCAGGATGACCAAGCTTCCTTCTCGGTGAATCCACAGTTCGCTGGTTCTTACGGCTACATTGCGCCGGAGTATGGGTGTATGCTGAAGATAACAGAGAAGAGCGATGTGTATAGCTACGGAGTGGTTCTATTAGAGATAATAACAGGAAAACGACCAGTGGACGCGTCGTTTGGTGAGGGTCTACATGTGATAGACTGGGTGAGAGACCACCTGAAGAAAAAGAAGGACCCTGTGGAGATTGTCGATCCAAAGCTTCAAGGCCACACAGACACACACATACAAGAGATGATTCAAACTCTCGGAATCTCCCTCCTCTGTACCAGCACTCGCCCCGATGATCGTCCCACCATGAAAGACGTCGCCGCCTTGCTCCGAGAGATCCGACACGATCCTCCCGTGGGCCACGAGGCCCACAAGCCCAAGCCCAAGCCCACCATTAACTCCTCCTCCTCCTCCTCTGTTACTCAAGCCCAGCTGTTGCTTCTTGATCAACCTTCGTCTCATTCTTCTTCGCTTGCTTATTCGTCTTCTACTCTACAAGGAAGGAGCGCGTGA 3363 0.474 MVVVVVMPENPWTTLLFLFQVTALLLHSQHSFVASAVNPQGQALLSWKTTSLNGSLEVLGNWDPIDETPCGWFGVSCNFKNEVVQLDLRDVDLLGSVPSNFTSLSSLTKLILIGTNLTGSIPKEIGSLSNLTYLDLSDNALTGEIPSELLFLPELQQLHLNSNQLEGSIPISIGNLTKLEWLTLYDNQLSGQIPRTIGNLKNLQVIRAGGNKNLEGALPQEIGNCTKLVMLGLAETSLSGFLPPTLGLLKKLNTIAIYTSLLSGQIPPELGDCTELENIYLYENSLTGSLPSRLGNLRNLKNLLLWQNNLVGTIPPEIGNCYQLSVIDISMNSLTGSIPKSLGNLTALEELQLSENQISGEIPTELGNCEQLTHIELDNNQITGTIPSEFGNLSNLTLLFLWHNNLEGNIPSALSNCQNLEAVDLSQNALTGPIPKGIFELKNLNKLLLLSNNLSGDIPSDIGNCSSLIRFRVSKNKITGSIPPQIGNLRNLNFLDLGFNRISGVIPEEMSGCRNLTFLDLHSNMIAGSLPESLSELVSLQFIDFSDNMIEGTLNPRLGSLGSLTKLILGKNHISGSIPSQLGSCSKLQLLDLSSNNFSGNIPGSLGNIPGLEIALNLSLNKLSGEIPQEFSGLVKLGILDISHNELTGNLHYLADLQNLVVLNISYNKFSGRIPETPFFAKLPISMLAGNPSLCLSGNRCAEDDSGSRSGRRAKTARIAMVVLLCTACALLLAALYVVVAAKRRQRDHGNDLDLDGRESDMEMGPPWEVTVYQKLDLSISDVAKCLTAGNVIGRGRSGVVYRVNMAAGLEMAVKRLRSSDKFSAVAFSSEITTLARIRHRNIVRLLGWAANRKTKLLFYDYLPNGNLDTLLHEGCTGLIEWEIRFKIALGVAEGLAYLHHDCVPAILHRDVKAQNILLGDGYEPCLADFGFARLVQDDQASFSVNPQFAGSYGYIAPEYGCMLKITEKSDVYSYGVVLLEIITGKRPVDASFGEGLHVIDWVRDHLKKKKDPVEIVDPKLQGHTDTHIQEMIQTLGISLLCTSTRPDDRPTMKDVAALLREIRHDPPVGHEAHKPKPKPTINSSSSSSVTQAQLLLLDQPSSHSSSLAYSSSTLQGRSA 1120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00202 1120 Gene3D Ribonuclease Inhibitor 373 438 IPR032675 -
Accr8g00202 1120 Gene3D Transferase(Phosphotransferase) domain 1 863 1077 - -
Accr8g00202 1120 Pfam Leucine rich repeat 298 358 IPR001611 GO:0005515
Accr8g00202 1120 Pfam Leucine rich repeat 470 526 IPR001611 GO:0005515
Accr8g00202 1120 Pfam Leucine rich repeat 153 212 IPR001611 GO:0005515
Accr8g00202 1120 Pfam Leucine rich repeat 371 430 IPR001611 GO:0005515
Accr8g00202 1120 ProSitePatterns Protein kinases ATP-binding region signature. 793 815 IPR017441 GO:0005524
Accr8g00202 1120 ProSiteProfiles Leucine-rich repeat profile. 130 153 IPR001611 GO:0005515
Accr8g00202 1120 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 436 530 - -
Accr8g00202 1120 Gene3D Ribonuclease Inhibitor 37 191 IPR032675 -
Accr8g00202 1120 Gene3D Ribonuclease Inhibitor 192 292 IPR032675 -
Accr8g00202 1120 SUPERFAMILY RNI-like 86 407 - -
Accr8g00202 1120 FunFam Putative LRR receptor-like serine/threonine-protein kinase 616 700 - -
Accr8g00202 1120 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 362 1055 - -
Accr8g00202 1120 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 863 1077 - -
Accr8g00202 1120 SUPERFAMILY Protein kinase-like (PK-like) 774 1062 IPR011009 -
Accr8g00202 1120 Gene3D Ribonuclease Inhibitor 293 372 IPR032675 -
Accr8g00202 1120 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 212 435 - -
Accr8g00202 1120 Gene3D Phosphorylase Kinase; domain 1 769 862 - -
Accr8g00202 1120 SMART LRR_typ_2 441 465 IPR003591 -
Accr8g00202 1120 SMART LRR_typ_2 297 321 IPR003591 -
Accr8g00202 1120 SMART LRR_typ_2 514 537 IPR003591 -
Accr8g00202 1120 SMART LRR_typ_2 176 200 IPR003591 -
Accr8g00202 1120 SMART LRR_typ_2 657 681 IPR003591 -
Accr8g00202 1120 SMART LRR_typ_2 128 152 IPR003591 -
Accr8g00202 1120 SMART LRR_typ_2 561 585 IPR003591 -
Accr8g00202 1120 SMART LRR_typ_2 489 513 IPR003591 -
Accr8g00202 1120 SMART LRR_typ_2 345 369 IPR003591 -
Accr8g00202 1120 SMART LRR_typ_2 393 417 IPR003591 -
Accr8g00202 1120 ProSiteProfiles Protein kinase domain profile. 787 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00202 1120 SMART LRR_sd22_2 393 422 - -
Accr8g00202 1120 SMART LRR_sd22_2 634 659 - -
Accr8g00202 1120 SMART LRR_sd22_2 176 202 - -
Accr8g00202 1120 SMART LRR_sd22_2 273 299 - -
Accr8g00202 1120 SMART LRR_sd22_2 489 512 - -
Accr8g00202 1120 SMART LRR_sd22_2 345 371 - -
Accr8g00202 1120 SMART LRR_sd22_2 128 151 - -
Accr8g00202 1120 SMART LRR_sd22_2 537 573 - -
Accr8g00202 1120 SMART LRR_sd22_2 513 536 - -
Accr8g00202 1120 Pfam Leucine rich repeat N-terminal domain 38 78 IPR013210 -
Accr8g00202 1120 Gene3D Ribonuclease Inhibitor 439 707 IPR032675 -
Accr8g00202 1120 SMART serkin_6 787 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00202 1120 MobiDBLite consensus disorder prediction 1065 1120 - -
Accr8g00202 1120 MobiDBLite consensus disorder prediction 1079 1120 - -
Accr8g00202 1120 SUPERFAMILY RNI-like 327 676 - -
Accr8g00202 1120 Pfam Protein kinase domain 790 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00202 1120 ProSitePatterns Serine/Threonine protein kinases active-site signature. 907 919 IPR008271 GO:0004672|GO:0006468
Accr8g00202 1120 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 37 211 - -
Accr8g00202 1120 Pfam Leucine Rich repeat 129 144 IPR001611 GO:0005515
Accr8g00202 1120 FunFam Leucine-rich repeat receptor protein kinase EMS1 531 615 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00202 Accr-Chr8 2775638 2780098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00202 36 1080 Receptor kinase-like Gene Family AT5G56040 54.237 0.0 1109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr8g00202 Pkinase 1.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00202 - - gmx:100778064 1642.86