Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00201 ATGGCTGTGACAAATGACCACTTCCAAACTGCTTTAGTTGCTTCAAATCCATCAGCTTTGCGTGAAACAGTTGTGGAGGTTCCCAATGTTTCCTGGGACGATATTGGGGGCTTGGAGAATGTTAAGAGGGAGCTTCAAGAGACTGTTCAATATCCAGTGGAGCATCCTGAAAAATTTGAGAAATTTGGCATGTCACCTTCGAAAGGTGTTCTCTTCTATGGACCTCCTGGCTGTGGTAAAACCCTTCTTGCTAAAGCAATTGCTAATGAATGCCAAGCCAACTTTATAAGTGTAAAAGGACCTGAGCTGCTAACAATGTGGTTTGGCGAAAGTGAGGCAAATGTGCGTGAAATATTTGACAAAGCCCGGCAATCAGCTCCATGTGTTCTTTTCTTTGATGAACTTGACTCTATTGCAACCCAGCGTGGCAGTTCCACAGGAGGTGCTGGAGGTGCTGCAGATAGGGTTTTGAACCAACTATTAACAGAAATGGATGGAATGACTGCTAAGAAAACAGTTTTCATTATTGGGGCAACAAACAGGCCTGACATTATAGACCCTGCATTGCTCCGGCCCGGACGTCTGGACCAACTGATATATATCCCACTGCCAGATGAGAATTCACGCCTTCAAATCTTCAAAGCATGTTTGAGGAAGTCACCAGTCTCCAAGGATGTTGATCTAACAGCACTTGCCCGTTTTACTCGTGGATTCAGTGGTGAAGACATCACAGAAATTTGTCAGAGAGCCTGCAAATATGCTATCAGAGAAGTTATTGAGAAGGGTATTGAGCAGGAGAGGAGAAAGAGAGAGGACGCTGAAGCTATGGAAGAGGATGAGGATCCCATTGATGAGGCCGCAGAGATAAAGCCATCACATTTCGAGGAATCCATGAAGTTTGCTCGCAGAAGCGTTAGCGATGCCGATATCAGGAAGCACCAACTCTTTGCTCAAACCTTGCAGCAGTCTCGTGGATTTGGATCGGAATTTCGGTTTGCAGATCGAACTGAGAACAGTTCAACTGGAGCTCCAGACCCTTTTCCTTCCACTACTGTAGCAGGAGACGATGATGATTTATACAGTTAA 1086 0.4521 MAVTNDHFQTALVASNPSALRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSTGGAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDENSRLQIFKACLRKSPVSKDVDLTALARFTRGFSGEDITEICQRACKYAIREVIEKGIEQERRKREDAEAMEEDEDPIDEAAEIKPSHFEESMKFARRSVSDADIRKHQLFAQTLQQSRGFGSEFRFADRTENSSTGAPDPFPSTTVAGDDDDLYS 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00201 361 FunFam Transitional endoplasmic reticulum ATPase 20 203 - -
Accr8g00201 361 PANTHER AAA-FAMILY ATPASE 1 323 - -
Accr8g00201 361 Pfam ATPase family associated with various cellular activities (AAA) 70 203 IPR003959 GO:0005524|GO:0016887
Accr8g00201 361 Coils Coil 256 276 - -
Accr8g00201 361 Gene3D - 16 203 IPR027417 -
Accr8g00201 361 MobiDBLite consensus disorder prediction 333 347 - -
Accr8g00201 361 SMART AAA_5 66 205 IPR003593 GO:0016887
Accr8g00201 361 ProSitePatterns AAA-protein family signature. 173 191 IPR003960 GO:0005524|GO:0016887
Accr8g00201 361 Pfam AAA+ lid domain 225 266 IPR041569 -
Accr8g00201 361 CDD RecA-like_CDC48_r2-like 41 201 - -
Accr8g00201 361 MobiDBLite consensus disorder prediction 327 361 - -
Accr8g00201 361 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 318 IPR027417 -
Accr8g00201 361 Gene3D - 207 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00201 Accr-Chr8 2771446 2773626 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00201 62 277 Calmodulin-binding Proteins AT3G56690 39.171 6.25e-42 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00201 K13525 - qsa:O6P43_022683 611.298