Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Accr8g00201 | ATGGCTGTGACAAATGACCACTTCCAAACTGCTTTAGTTGCTTCAAATCCATCAGCTTTGCGTGAAACAGTTGTGGAGGTTCCCAATGTTTCCTGGGACGATATTGGGGGCTTGGAGAATGTTAAGAGGGAGCTTCAAGAGACTGTTCAATATCCAGTGGAGCATCCTGAAAAATTTGAGAAATTTGGCATGTCACCTTCGAAAGGTGTTCTCTTCTATGGACCTCCTGGCTGTGGTAAAACCCTTCTTGCTAAAGCAATTGCTAATGAATGCCAAGCCAACTTTATAAGTGTAAAAGGACCTGAGCTGCTAACAATGTGGTTTGGCGAAAGTGAGGCAAATGTGCGTGAAATATTTGACAAAGCCCGGCAATCAGCTCCATGTGTTCTTTTCTTTGATGAACTTGACTCTATTGCAACCCAGCGTGGCAGTTCCACAGGAGGTGCTGGAGGTGCTGCAGATAGGGTTTTGAACCAACTATTAACAGAAATGGATGGAATGACTGCTAAGAAAACAGTTTTCATTATTGGGGCAACAAACAGGCCTGACATTATAGACCCTGCATTGCTCCGGCCCGGACGTCTGGACCAACTGATATATATCCCACTGCCAGATGAGAATTCACGCCTTCAAATCTTCAAAGCATGTTTGAGGAAGTCACCAGTCTCCAAGGATGTTGATCTAACAGCACTTGCCCGTTTTACTCGTGGATTCAGTGGTGAAGACATCACAGAAATTTGTCAGAGAGCCTGCAAATATGCTATCAGAGAAGTTATTGAGAAGGGTATTGAGCAGGAGAGGAGAAAGAGAGAGGACGCTGAAGCTATGGAAGAGGATGAGGATCCCATTGATGAGGCCGCAGAGATAAAGCCATCACATTTCGAGGAATCCATGAAGTTTGCTCGCAGAAGCGTTAGCGATGCCGATATCAGGAAGCACCAACTCTTTGCTCAAACCTTGCAGCAGTCTCGTGGATTTGGATCGGAATTTCGGTTTGCAGATCGAACTGAGAACAGTTCAACTGGAGCTCCAGACCCTTTTCCTTCCACTACTGTAGCAGGAGACGATGATGATTTATACAGTTAA | 1086 | 0.4521 | MAVTNDHFQTALVASNPSALRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSTGGAGGAADRVLNQLLTEMDGMTAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDENSRLQIFKACLRKSPVSKDVDLTALARFTRGFSGEDITEICQRACKYAIREVIEKGIEQERRKREDAEAMEEDEDPIDEAAEIKPSHFEESMKFARRSVSDADIRKHQLFAQTLQQSRGFGSEFRFADRTENSSTGAPDPFPSTTVAGDDDDLYS | 361 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Accr8g00201 | 361 | FunFam | Transitional endoplasmic reticulum ATPase | 20 | 203 | - | - | |
Accr8g00201 | 361 | PANTHER | AAA-FAMILY ATPASE | 1 | 323 | - | - | |
Accr8g00201 | 361 | Pfam | ATPase family associated with various cellular activities (AAA) | 70 | 203 | IPR003959 | GO:0005524|GO:0016887 | |
Accr8g00201 | 361 | Coils | Coil | 256 | 276 | - | - | |
Accr8g00201 | 361 | Gene3D | - | 16 | 203 | IPR027417 | - | |
Accr8g00201 | 361 | MobiDBLite | consensus disorder prediction | 333 | 347 | - | - | |
Accr8g00201 | 361 | SMART | AAA_5 | 66 | 205 | IPR003593 | GO:0016887 | |
Accr8g00201 | 361 | ProSitePatterns | AAA-protein family signature. | 173 | 191 | IPR003960 | GO:0005524|GO:0016887 | |
Accr8g00201 | 361 | Pfam | AAA+ lid domain | 225 | 266 | IPR041569 | - | |
Accr8g00201 | 361 | CDD | RecA-like_CDC48_r2-like | 41 | 201 | - | - | |
Accr8g00201 | 361 | MobiDBLite | consensus disorder prediction | 327 | 361 | - | - | |
Accr8g00201 | 361 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 28 | 318 | IPR027417 | - | |
Accr8g00201 | 361 | Gene3D | - | 207 | 317 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Accr8g00201 | Accr-Chr8 | 2771446 | 2773626 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Accr8g00201 | 62 | 277 | Calmodulin-binding Proteins | AT3G56690 | 39.171 | 6.25e-42 | 154 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Accr8g00201 | K13525 | - | qsa:O6P43_022683 | 611.298 |