Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00182 ATGCAGAGCACAGCTTTCACTCTCTCCCCTTCGCTTACTCTTCACAAACCTCGCAGACCTTTTATCTCCAACCGCTTCGATCCCTCACATTTCTCTCTCTCTGCTTCCTCTCCCAAGCCCAATGAAAGCTCCTCCTCGTCGTTCCATCGCCGATATTGGTCCGTTGCTTCTTCTTCTTCTTCTTCCTCTTTTAAGTTTAGGCCCTCGACATCTCTGCCCACTCCTGCTTCCTCTGATCCTGATGCTACTCGCTTTGAGACCCGGGCTACTTCTGTGCCGGAGAGCGCGGATGAGGGTTCTAACGCCTTATTGAAAACTCTGCAGCTCGGATCCTTGTTTGGCCTCTGGTACCTCTTCAATATATACTTTAATATCTACAATAAGCAGGTCTTGAAGGTGTACCAGTTTCCAGTAACTGTCACTGCGATTCAATTTGCTGTTGGGGCTGTCCTTGTCTTATTTTTATGGACTTTTAATCTCCATAAAAGGCCTAAAATAAGTGGTTCCCTGCTTGCAGCCATACTTCCTTTGGCTATGGTGCATACTTTAGGGAACCTTTTCACTAATTTGAGCCTTGGAAAGGTAGCCGTGTCATTCACTCACACTATCAAAGCAATGGAGCCTTTCTTTTCAGTGGTTCTTTCTGCTATATTCCTTGGAGAGATGCCAACTGCATTGGTGGTCGCTTCACTTGTGCCTATTGTCGGTGGTGTGGCACTGGCATCTGTCACTGAGGCCTCATTTAATTGGGCTGGATTTGGGAGTGCAATGGCATCTAATTTGACGTTTCAGTCTCGTAATGTTCTCAGCAAAAAAGTCATGGTTAATAAAGAGGAAACAATGGACAATATAAACCTCTTCTCAACAATAACTGTTATGTCCTTCTTTTTGTTAGCACCTGTGGCTATCTTCATGGAAGGCGTTAAATTTACCCCTGCATACCTCCAATCTGCCGGGTTAAATGTTAGACAACTGTACACCAGATCTCTTATTGCTGCACTCTGTTTCCATGCATATCAACAAGTTTCTTATATGATATTGCAGAGGGTATCACCCGTTACCCACTCTGTGGGCAACTGTGTGAAGCGGGTTGTGGTCATTGTGAGCTCTGTCCTCTTCTTCAAAACACCTGTATCACCTATTAACGCTTTAGGCACTGGTATAGCTCTTTCCGGTGTGTTCCTTTATTCAAGGGCAAAGCGAAGTAAGCCAAAGACAAAGACAGCTTAA 1230 0.4496 MQSTAFTLSPSLTLHKPRRPFISNRFDPSHFSLSASSPKPNESSSSSFHRRYWSVASSSSSSSFKFRPSTSLPTPASSDPDATRFETRATSVPESADEGSNALLKTLQLGSLFGLWYLFNIYFNIYNKQVLKVYQFPVTVTAIQFAVGAVLVLFLWTFNLHKRPKISGSLLAAILPLAMVHTLGNLFTNLSLGKVAVSFTHTIKAMEPFFSVVLSAIFLGEMPTALVVASLVPIVGGVALASVTEASFNWAGFGSAMASNLTFQSRNVLSKKVMVNKEETMDNINLFSTITVMSFFLLAPVAIFMEGVKFTPAYLQSAGLNVRQLYTRSLIAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVLFFKTPVSPINALGTGIALSGVFLYSRAKRSKPKTKTA 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00182 409 PANTHER SOLUTE CARRIER FAMILY 35 108 403 - -
Accr8g00182 409 Pfam Triose-phosphate Transporter family 107 397 IPR004853 -
Accr8g00182 409 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 107 407 IPR004696 GO:0016020|GO:0022857|GO:0055085
Accr8g00182 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 149 243 - -
Accr8g00182 409 MobiDBLite consensus disorder prediction 60 93 - -
Accr8g00182 409 SUPERFAMILY Multidrug resistance efflux transporter EmrE 321 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00182 Accr-Chr8 2568177 2571204 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00182 1 409 Antiporters AT5G33320 69.082 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00182 K15283 - zju:107418346 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00182 8 2568177 2571204 Accr12g00541 12 5040879 5044028 CCT
Accr8g00182 8 2568177 2571204 Accr12g00541 12 5040879 5044028 ECH
Accr8g00182 8 2568177 2571204 Accr8g00182 8 2568177 2571204 ECH