Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00151 ATGGCCAGTGTTCCACGCAAGACTCAGCAAATAGGTGATAGCTTGAGGTATTCTCCCCCCGAGTCGCCTCTCTCTTCATTGCAAGCTCCTTCTTACATAGCTATAAATGAGAAAGAAGAATCATCTCCTTCTTCAACTGTAAGCAAAATCACCCCACTTATTCTTTTAGTAATAATTGTTCTGGCAGTCATCTTCTTCATCTATGGAATCATTCATTTGGTTCTTTGGCTTCTAATGAGAACCCCACCATCATCTTCACCTCTATATCATTCCAATAGATTTCCAGAATCCACACGCTCTCGTGCTTTTCCAAGGCAGCTTCATCATCTCTTTCGCTTACATGATTCAGGATTAGAACAGTCTCTCATAGATGCTCTTCCTGTTTTTTACTACGAGGATGTCTTGGGTTTGAAAGAACCATTTGATTGTGCTGTATGTCTCTGTGAATTCTCCGAGCAGGACAAGCTGAGGTTGTTGCCAATGTGTGGCCATGCTTTTCACATCAGTTGTCTTGACACTTGGCTCCTCTCAAACTCTACATGCCCTCTTTGCAGAGCGATAATCTCATCAAGTTCAGATTTTTCTGCGGAAAATCCGTTGTTCAACAATGATAAGTGGGTTTTTAACAGATTCAAAGGAGATGAAGAGAATGCCAATGGATGTTCGCATACTGAGAAAGTTCTGGGTAATGAAGATCGAATGACAGAAGAAAGGGTTTTTTCTGTGAGGCTTGGAAAGTTCAGAAACATTGATGGACGAGAAGTGGAGGTTGGAGAAGAAGAAGGCAGTAGTTGTAATATGGATGGAAGGAGATGCTTCTCCATGGGGTCTTATCAGTATGTGGTGAGTGGTTCAAATCTGCAAGTGGTTCTTTCTGATGTTTCAGACAATGAGGAAGCTGTGGAGGGGAAGAAGATAGGAGATAGAATCAGAGGTGAGAGCTTCTCCGTTTCAAAGATATGGCTTTGGTCTAACAAGAGCAAGTTTCGAAGTTGTTCTGATGATGCTGTTTTCCCTTGGTTGCTGTGA 1029 0.4218 MASVPRKTQQIGDSLRYSPPESPLSSLQAPSYIAINEKEESSPSSTVSKITPLILLVIIVLAVIFFIYGIIHLVLWLLMRTPPSSSPLYHSNRFPESTRSRAFPRQLHHLFRLHDSGLEQSLIDALPVFYYEDVLGLKEPFDCAVCLCEFSEQDKLRLLPMCGHAFHISCLDTWLLSNSTCPLCRAIISSSSDFSAENPLFNNDKWVFNRFKGDEENANGCSHTEKVLGNEDRMTEERVFSVRLGKFRNIDGREVEVGEEEGSSCNMDGRRCFSMGSYQYVVSGSNLQVVLSDVSDNEEAVEGKKIGDRIRGESFSVSKIWLWSNKSKFRSCSDDAVFPWLL 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00151 342 CDD RING-H2_EL5-like 142 185 - -
Accr8g00151 342 SMART ring_2 143 184 IPR001841 -
Accr8g00151 342 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 46 321 - -
Accr8g00151 342 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 194 IPR013083 -
Accr8g00151 342 SUPERFAMILY RING/U-box 122 191 - -
Accr8g00151 342 FunFam E3 ubiquitin-protein ligase ATL6 106 191 - -
Accr8g00151 342 Pfam Ring finger domain 142 185 IPR001841 -
Accr8g00151 342 MobiDBLite consensus disorder prediction 1 25 - -
Accr8g00151 342 ProSiteProfiles Zinc finger RING-type profile. 143 185 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00151 Accr-Chr8 2111037 2112065 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00151 38 333 C3H Transcription Factor Family AT2G18650 39.003 3.83e-55 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00151 - - ccaj:109807149 353.984
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00151 8 2111037 2112065 Accr8g00151 8 2111037 2112065 ECH