Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00141 ATGCATGGGCGTGGAGGTGAGGAGAGGAAACGAACTCGGCACATGTGGACAAGCCCCACTCGTGGCCAACCGATTGTAACCGCTGTTCCCGATGTTTCTTCTTCATCTTCGCCTACAGCTAATTCATTCTATAAGGGTGGTCGTAAAATTAATATTGGTGACTGTGCTCTCTTCAAACCACCGCAGAAGTGTCCACCTTTTGTTGGAATAATTCGTTCGCTGACAGTTGGCAAAGAGGGTAAATTGAAGATACTTGTTAATTGGCTTTATCGGTCTGCTGAATTAAACCTTGGCAAAGCTCTCCTGCTGGAGACTGCGCCAAACGAAGTTTTCTATTCCTTTCATAAGGATGAGATTCCTGCTGCCTCCCTTCTGCATCCTTGTAAAGTTGCATTTCTTCCCAAGGGCGTCGAACTGCTATCAGGGACTTCGTCATTTGTGTGTAGGAGGGTTTATGACATTGCAAACAAGTGTTTATGGTGGTTAACTGACCAAGATTATATTAATGTACTTCAAGAAGAAGTAGATCAGCTATTGTATAGGACTCGTATTGAAATGCATGCTACAGTGCAACCGGGTGGTCGATCTCCAAAGCCAATGAGTAGTCCAACGTCATCACAGTTAAAATCAGGTTCAGATAGTGTCCAGAATAGCACTTCTTCTTTTCCTTCTCAAGTTAAGGGCAGGAAAAGGGAGAGGGTAGATCAAGGGCCTGAATCTGCCAAGCGAGAACGTACAACAAAAGTTGAGGATGGAGACTCTGGTCATTCTAGACAGGAGAATATTTTAAAGACAGAGCTTGCAAAAATTACAGAAAAGGGGGTGCTTGTCAATGCTGAAGGGGTTGAGAAGCTTGTGCAGCTTATGCATCCTGATAGGAATGTAAAAAAGATAGATTTGGCTAGCCGGTCAATGCTTGCTGCTGTTGTTGCTGCGACAGATAAATTTGATTGTCTTAGTCAGTTTGTGCAGCTGAAGGGTTTGCCGGTGTATGATGAATGGCTTCAGGAGGTTCATAAAGGGAAGATTGGTGATGGAAGTGGGTCTAAGGACAGTGATAAATCTGTTGAAGAATTTCTTTTGGTATTACTTCGGGCACTTGATAAGCTTCCCGTAAATCTTCAAGCTCTACAGACATGTCACATTGGTAAATCTGTGAATCATTTGCGAACTCATAAAAACTCAGAAATCCAGAGGAAAGCTAGGGGTTTAGTTGACACATGGAAGAAACGTGTTGAAGCTGAAATGAACATTAATGATGCCAAAACTGGTTCTGGTCAAACTGTCCCCTGGCCTACTAGGACACGCCTCTCTGAAGTTGGCCAGGGTGGGAATAAAAATTCAGGTGGATCATCTGATGTTGCTGTTAAGAGCTCGGTTACACAGCTCTCTGCATCCAGAACTTCCTCTGTGAAGATTACCCAGGGAGAGAATGCTGCCAGATCTGCATCTCCTGGGTCTATGAAGTCAGTCCCCTCACCAACCTCAGCAACTATAAATTCAAAAGATGGACCGCCCCGTGCTGCTGCTCTTAGTGGAGTTTCTGATCTCCCCATATCAAATGCAAGGGATGAGAAAAGTAGTAGTTCTAGTCAATCTCATAATAACAGTCAGTCTTGTTCCAGTGACCATGCTAAAAATGGGGGGTTTTCAGGAAAGGAGGATGCTAGGAGCTCTACTGCCATGAGTGTGAATAAAATATCGGGCAATTCATCACGGCACCGAAAGTCTGTTAATGGAATCTCAGGTGCAACTCCATCTGGAGGGCAAAGGGAGTCTGTTCGAAATTCCTCTGTACACAAAAGTTCATCTTCTGAAAAACTGTCTCAATCTGGATTAACAGAAAAGGCGCATGATGGGACATCTCATGAGGGAAGTACTCCCAAGCTGATTGTTAAGATTCCAAAGCGAGGTCGGAGTCCTGCAGGAAGTGCAAGTGGAGGTTCTTTTGATGATCCTTCAATCATGAACAGTCGAGCCTCATCTCCTGTTTTTTCAGAGAAGAATGAGCATTATGATCATAGCTCAAAAGAAAAGATTGATTTTTATCGAGCTAATACTGGTGCGGATATTAATACTGAATCCTGGCAGAGTAATGATTTTAAAGATGTACTAACAGCATCTGATGAAGGCAATGGATCACCTGCTGCTGTTACTGATGAAGAGCGCTGCAGGACTGGCAGTGATTCTAAGAAGATGATGGAAGCATCAAAAACTGCTTCTTCATCTTCTGGAAATGAAAATAAGGCAGTAAATACTCAGGATGCTTCTTTCAGCTCCATAAATGCTTTGATAGATAGTTGTGTAAAGTATTCAGAAACTAATGCTTCTTTGTCTGCGGTTGATGATGTTGGAATGAAGCTTCTTGCCAGTGTAGCGGCTGGTGAGATTTCCAAATCTGAATTGACAACCCCTGCTGGATCACCTGAAATAAACACTAATGCGGTTGAACAGTCATGTCCAGGTAATGCCATGGAGTGTGAAGGAAAGTTGGTTCAAAATGAATGTCATGCAAGTACTGGCATTGATGAACATAAGAAGCAAGATATGGTATCTGGTGATTCACGTGCTAATAATGATAACGGTTTGGGTCTTTTGGTATCTGAAGTGAAGGATCCTGAGGAGCAAAATAGGCATATTACTTCATCTAGTATGGGTTTGCAGGGGGTTACAGAAGCCTGTCCAGAAAGCAAGGAAAAATCAAGTGAAATTCCAGTTACTGCTGCATCTTCTGGCCTTCCTGAAAGCACAGTGCAAGAAGCCAGAGGTAGTGAATGTAGCAAACAGTGCAAGGAAAACAAAACTGTTGGGAATGTTAATGCAGGTGGAGATCTTGATGTTAAAGCTAATGAGGTTGCCAGAGAAGTTGAGATGGAGTACATTGACAAATTGACACCGCACCCCTCTGTGGAGGTTGATCTGAAAGAAAGTTGTACGATTGAGGAATTAAGCAGGTGTGGACAGACTGCTCAGAAGGTTCCTTTGGTTGTTATGGAGGATTCAGTGAAAGGAACTGATGAGAATGTGTTGCATCCTTCTGTTGATTGTGTTGGTCAGGCTGTAGAAGACCACAGTGATAGAGAATGTAGAAAGGCTGCTGATGTGGCTGCTCGAAGTCATGCAGGTCAGTCTGAAATCCAAAGAAATGAGTTTGAAAGAGATGCTGTGACAACGCCTGAGAACAGAAGTACAACAGTTTTAGGTTCAGGTGACACTTGTCTTGCTTCTGAGCACGTGGAGGAGAATTCAGAAACAAAAGAGTCTCATGACCAACATGCTGGGCAGAATCTGCAGAGAGCTTCACCGAGCTTGCCTTCACAAGAAATGGAGCAGCGTCCTGGCTCTAAAGAATCTAGATCGGCTGCCATTGAAACAGAGGAAGCTGAAGAGTGCACCTCTGCCACTGCAGACGCCTCTTCCATGTCTGCCACTGGTGTGTCTGATGTGGCAGATGCAAAAGTTGGGTTTGATTTAAATGAAGGCTTCAGCGCGGAAGATGGAAAATCTGTAGAGTTCAATAGCATTCCTGTGTCTGGTTGTGCACCTGCTGTACGAGTGATCAGTCCAGTGCCATTTCCTGCTTCAACCATGTCTAGTGGTATTACTTCCTCAATCACTGTTGCTGCAGCTGCAAAGGGGCCCTTTGTGCCACCTGAAGACTTGTTGAAAAGTAAAGGGGGGGAGCTTGGTTGGAGGGGATCAGCTGCCACCAGTGCATTCCGGCCTGCTGAACCCAGAAAAATTGTAGAAATACCTCTTGGCACACCATCAGCAGCTCCTATATCTGATGCTACAGCTGGAAAGCAGGGTCGGCAATTATTAGATATTGACTTAAATGTGCCTGATGAAAGGATGCTTGAGGATACAGCCTCTCAAGCTAGTTCTCATCAGCCAGCAGATGGCGGTTCCTCTGTTCGCTGCTCTGGAGGTCTTGGTCTTGACTTAAACCAAGTAGATGAAGCTTCTGATGTCGGCAATTGTTCCACAAGCAATGGTCATAAAATGGATGTGCAATTTCTGCAGGTGAAACAATCATCCAGTGTTCATCCAAATAGAGAGGCAAGTGCCCTTAGGGACTTTGATTTGAATGACGGGCCTGCTGTTGATGAAATCATCATGGAGCCAACATTGTTCACTCAGCAATCCAGAAGCAATGTACCATCACAGCCCCCCGCATCTGGACCTAGAATGAGTAGTACTGAACTGGGGAGTTTCTCATCATGGTTTCCTTCAACTGGGAACACCTATTCAGCTGTCACAATATCTTCAATTATGCCTGATAGAGGGGATCAGCCCTTTTCAATTGTTGCACCTAATGGGCCGCAAAGAATGCTGGTTCCTGCTACTGGTGGCAGCCCATTTGGACCTGATGTTTATAGGGGACCAGTGCTGTCATCTTCTGCTATGCCATATCCATCTGCGCCATATCAGTATCCTCCTGTCTTCCCTTTTAATTCCAGCTTTCCTCTTCCATCATCATCATTTTCAGGTGGATCAACTACTTATGTAGATTCAGCATCTGGTGGAAGACTTTTCTTTCCCACAGTAAATTCACAGTTAATTGGACCTGCCAGTACTGTTTCATCTCATTACACCGCCAGGCCTTATGTCTTTAGTCTTCCTGATGGTAGTGGTACTGCTGATGGTAAGAGACGGAGAGGGCAGGGTTTAGACCTTAATGCTGGGCCTGGAGGTCCTGAAGTGGAGGGCAGAGATGAGAGCTCAGCTCTGTTGCCAAGGCAACTTCCTGTTGCCAGTTCACAGGCCCTAGCTGAGGAGCAGGTGAGGATGTTCCAGCTGGCTGGTGGTGTTCTCAGGAGGAAGGAACCAGATGGTGGATGGGATAGCTACAAGCAATCCTCTTGGCAATAG 4872 0.4493 MHGRGGEERKRTRHMWTSPTRGQPIVTAVPDVSSSSSPTANSFYKGGRKINIGDCALFKPPQKCPPFVGIIRSLTVGKEGKLKILVNWLYRSAELNLGKALLLETAPNEVFYSFHKDEIPAASLLHPCKVAFLPKGVELLSGTSSFVCRRVYDIANKCLWWLTDQDYINVLQEEVDQLLYRTRIEMHATVQPGGRSPKPMSSPTSSQLKSGSDSVQNSTSSFPSQVKGRKRERVDQGPESAKRERTTKVEDGDSGHSRQENILKTELAKITEKGVLVNAEGVEKLVQLMHPDRNVKKIDLASRSMLAAVVAATDKFDCLSQFVQLKGLPVYDEWLQEVHKGKIGDGSGSKDSDKSVEEFLLVLLRALDKLPVNLQALQTCHIGKSVNHLRTHKNSEIQRKARGLVDTWKKRVEAEMNINDAKTGSGQTVPWPTRTRLSEVGQGGNKNSGGSSDVAVKSSVTQLSASRTSSVKITQGENAARSASPGSMKSVPSPTSATINSKDGPPRAAALSGVSDLPISNARDEKSSSSSQSHNNSQSCSSDHAKNGGFSGKEDARSSTAMSVNKISGNSSRHRKSVNGISGATPSGGQRESVRNSSVHKSSSSEKLSQSGLTEKAHDGTSHEGSTPKLIVKIPKRGRSPAGSASGGSFDDPSIMNSRASSPVFSEKNEHYDHSSKEKIDFYRANTGADINTESWQSNDFKDVLTASDEGNGSPAAVTDEERCRTGSDSKKMMEASKTASSSSGNENKAVNTQDASFSSINALIDSCVKYSETNASLSAVDDVGMKLLASVAAGEISKSELTTPAGSPEINTNAVEQSCPGNAMECEGKLVQNECHASTGIDEHKKQDMVSGDSRANNDNGLGLLVSEVKDPEEQNRHITSSSMGLQGVTEACPESKEKSSEIPVTAASSGLPESTVQEARGSECSKQCKENKTVGNVNAGGDLDVKANEVAREVEMEYIDKLTPHPSVEVDLKESCTIEELSRCGQTAQKVPLVVMEDSVKGTDENVLHPSVDCVGQAVEDHSDRECRKAADVAARSHAGQSEIQRNEFERDAVTTPENRSTTVLGSGDTCLASEHVEENSETKESHDQHAGQNLQRASPSLPSQEMEQRPGSKESRSAAIETEEAEECTSATADASSMSATGVSDVADAKVGFDLNEGFSAEDGKSVEFNSIPVSGCAPAVRVISPVPFPASTMSSGITSSITVAAAAKGPFVPPEDLLKSKGGELGWRGSAATSAFRPAEPRKIVEIPLGTPSAAPISDATAGKQGRQLLDIDLNVPDERMLEDTASQASSHQPADGGSSVRCSGGLGLDLNQVDEASDVGNCSTSNGHKMDVQFLQVKQSSSVHPNREASALRDFDLNDGPAVDEIIMEPTLFTQQSRSNVPSQPPASGPRMSSTELGSFSSWFPSTGNTYSAVTISSIMPDRGDQPFSIVAPNGPQRMLVPATGGSPFGPDVYRGPVLSSSAMPYPSAPYQYPPVFPFNSSFPLPSSSFSGGSTTYVDSASGGRLFFPTVNSQLIGPASTVSSHYTARPYVFSLPDGSGTADGKRRRGQGLDLNAGPGGPEVEGRDESSALLPRQLPVASSQALAEEQVRMFQLAGGVLRRKEPDGGWDSYKQSSWQ 1623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00141 1623 MobiDBLite consensus disorder prediction 733 752 - -
Accr8g00141 1623 MobiDBLite consensus disorder prediction 650 665 - -
Accr8g00141 1623 Pfam TFIIS helical bundle-like domain 363 412 IPR017923 -
Accr8g00141 1623 Pfam BAH domain 50 156 IPR001025 GO:0003682
Accr8g00141 1623 MobiDBLite consensus disorder prediction 195 225 - -
Accr8g00141 1623 MobiDBLite consensus disorder prediction 420 502 - -
Accr8g00141 1623 MobiDBLite consensus disorder prediction 1094 1111 - -
Accr8g00141 1623 CDD TFIIS_I 337 413 - -
Accr8g00141 1623 SMART BAH_4 48 163 IPR001025 GO:0003682
Accr8g00141 1623 MobiDBLite consensus disorder prediction 1031 1144 - -
Accr8g00141 1623 PANTHER BAH AND TFIIS DOMAIN-CONTAINING PROTEIN-RELATED 1 1623 - -
Accr8g00141 1623 MobiDBLite consensus disorder prediction 553 616 - -
Accr8g00141 1623 MobiDBLite consensus disorder prediction 1288 1302 - -
Accr8g00141 1623 SMART TFS2_5 335 414 IPR003617 GO:0005634
Accr8g00141 1623 MobiDBLite consensus disorder prediction 1376 1400 - -
Accr8g00141 1623 MobiDBLite consensus disorder prediction 226 260 - -
Accr8g00141 1623 MobiDBLite consensus disorder prediction 1112 1126 - -
Accr8g00141 1623 MobiDBLite consensus disorder prediction 521 546 - -
Accr8g00141 1623 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 317 426 IPR035441 -
Accr8g00141 1623 ProSiteProfiles TFIIS N-terminal domain profile. 336 415 IPR017923 -
Accr8g00141 1623 MobiDBLite consensus disorder prediction 1287 1308 - -
Accr8g00141 1623 MobiDBLite consensus disorder prediction 1540 1575 - -
Accr8g00141 1623 ProSiteProfiles BAH domain profile. 48 163 IPR001025 GO:0003682
Accr8g00141 1623 Gene3D - 35 279 IPR043151 -
Accr8g00141 1623 MobiDBLite consensus disorder prediction 705 752 - -
Accr8g00141 1623 MobiDBLite consensus disorder prediction 1077 1093 - -
Accr8g00141 1623 MobiDBLite consensus disorder prediction 189 260 - -
Accr8g00141 1623 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 280 416 IPR035441 -
Accr8g00141 1623 MobiDBLite consensus disorder prediction 416 675 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00141 Accr-Chr8 1928480 1934562 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Accr8g00141 BAH 1.8e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00141 - - ccaj:109810746 1927.14