Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00114 ATGACCATCGCCGGCGACGTTTTCAGGCTCAATTTGCCTCAAGTTCTCGACGATTCGCCTTCCTGTTCTCAGGACTTCCACGTTCTCGCCGTCGATGACAGTCATGTCGATCGCAAGGTCATCGAACGCTTGCTCAAAATTTCTTCCTGCAAAGTGACGGTTGTGGATAGTGGAACCAGAGCTTTACAATATTTGGGATTGGACGGAGAGCAGAACTCCATTGGGTTTAATAGTGCAAAGGTTAATCTAATCATGACGGACTATTCCATGCCGGGGATGACAGGATATGAACTTCTTAAGAAGATCAAGCAGGAGTCATCTATGTTTAGAGAGATTCCAGTGGTGATCATGTCTTCTGAGAACATTTTGACACGAATTGATAGGTGTTTGGAGGAAGGAGCAGAGGAATTTCTATTGAAGCCAGTGAAGTTATCAGATGTGAAACGATTGACTGATTTCATCATGAAAGGTGAAACGAAGGGAAAGGAGAAGAGATCTCACAAAAGAAGGCGATCTGATGATCAAAGTTCATCTCCATCAACACTGCCCTTATCCAAGTCTCATCCATCATTGTCACCATCTTCCTTGTCATCCAAGAGATCTAGACTACAAGCAGATTTTGACTAG 627 0.4386 MTIAGDVFRLNLPQVLDDSPSCSQDFHVLAVDDSHVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEQNSIGFNSAKVNLIMTDYSMPGMTGYELLKKIKQESSMFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLSDVKRLTDFIMKGETKGKEKRSHKRRRSDDQSSSPSTLPLSKSHPSLSPSSLSSKRSRLQADFD 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00114 208 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 185 IPR045279 GO:0009736
Accr8g00114 208 SUPERFAMILY CheY-like 25 156 IPR011006 -
Accr8g00114 208 CDD REC_typeA_ARR 28 150 - -
Accr8g00114 208 Gene3D - 27 203 - -
Accr8g00114 208 Pfam Response regulator receiver domain 28 148 IPR001789 GO:0000160
Accr8g00114 208 MobiDBLite consensus disorder prediction 176 202 - -
Accr8g00114 208 ProSiteProfiles Response regulatory domain profile. 27 155 IPR001789 GO:0000160
Accr8g00114 208 SMART REC_2 26 151 IPR001789 GO:0000160
Accr8g00114 208 MobiDBLite consensus disorder prediction 158 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00114 Accr-Chr8 1562119 1572897 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00114 13 169 Response Regulator Gene Family AT3G48100 73.620 9.20e-78 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr8g00114 Response_reg 1.1e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00114 K14492 - gmx:100527518 254.988