Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00113 ATGACCATCGCCGGCGACGTTTTCAGGCTCAATTTGCCTCAAGTTCTCGACGATTCGCCTTCCTGTTCTCAGGACTTCCACGTTCTCGCCGTCGATGACAGTCATGTCGATCGCAAGGTCATCGAACGCTTGCTCAAAATTTCTTCCTGCAAAGTGACGGTTGTGGATAGTGGAACCAGAGCTTTACAATATTTGGGATTGGACGGAGAGCAGAACTCCATTGGGTTTAATAGTGCAAAGGTTAATCTAATCATGACGGACTATTCCATGCCGGGGATGACAGGATATGAACTTCTTAAGAAGATCAAGGAGTCATCTATGTTTAGAGAGATTCCAGTGGTGATCATGTCTTCTGAGAACATTTTGACACGAATTGATAGGTGTTTGGAGGAAGGAGCAGAGGAATTTCTATTGAAGCCAGTGAAGTTATCAGATGTGAAACGATTGACTGATTTCATCATGAAAGGTGAAACGAAGGGAAAGGAGAAGAGATCTCACAAAAGAAGGCGATCTGATGATCAAAGTTCATCTCCATCAACACTGCCCTTATCCAAGTCTCATCCATCATTGTCACCATCTTCCTTGTCATCCAAGAGATCTAGACTACAAGCAGATTTTGACTAG 624 0.4375 MTIAGDVFRLNLPQVLDDSPSCSQDFHVLAVDDSHVDRKVIERLLKISSCKVTVVDSGTRALQYLGLDGEQNSIGFNSAKVNLIMTDYSMPGMTGYELLKKIKESSMFREIPVVIMSSENILTRIDRCLEEGAEEFLLKPVKLSDVKRLTDFIMKGETKGKEKRSHKRRRSDDQSSSPSTLPLSKSHPSLSPSSLSSKRSRLQADFD 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00113 207 ProSiteProfiles Response regulatory domain profile. 27 154 IPR001789 GO:0000160
Accr8g00113 207 MobiDBLite consensus disorder prediction 157 207 - -
Accr8g00113 207 CDD REC_typeA_ARR 28 149 - -
Accr8g00113 207 Gene3D - 27 202 - -
Accr8g00113 207 PANTHER TWO-COMPONENT RESPONSE REGULATOR 26 184 IPR045279 GO:0009736
Accr8g00113 207 SMART REC_2 26 150 IPR001789 GO:0000160
Accr8g00113 207 SUPERFAMILY CheY-like 25 155 IPR011006 -
Accr8g00113 207 FunFam Response regulator 3 26 184 - -
Accr8g00113 207 Pfam Response regulator receiver domain 28 147 IPR001789 GO:0000160
Accr8g00113 207 MobiDBLite consensus disorder prediction 175 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00113 Accr-Chr8 1562119 1572897 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00113 13 168 Response Regulator Gene Family AT3G48100 74.074 1.30e-79 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Accr8g00113 Response_reg 1.4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00113 K14492 - gmx:100796843 256.144