Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00102 ATGTCTCGATCACTCTCCGCCACCTCCACTGATGGAGGCGAAGCTTCTTCCCCCGCCTCCGCTGGCGAGATCATGTTGTTTGGCGTTAGAGTCGTCGTCGATTCCATGAGGAAGAGTGTGAGTTTGAACAATCTCTCGCAGTACGAGCATCCTCAGGATGGCTCGAATAACAACAAGGAAGATGTTCTCGCTGCTGGTTATGCCTCCGTCGACGATGCTGTTGTTCATAATTCCGGCAAGCACCGCGAGCGCGAGCGCAAACGAGGGGTTCCATGGACGGAGGATGAACACAGGCTGTTCTTGCTGGGATTGCAGAAGGTAGGGAAGGGCGATTGGAGAGGGATATCAAGGAACTATGTGAAAACAAGGACTCCTACACAGGTTGCGAGCCATGCTCAGAAGTACTTCCTTCGAAAATGCAACCTCAATCGTCGACGTCGTAGATCCAGCTTGTTTGACATGACTACTGACTCGGTTTCGGCAAATCCAGTGGAAGAACAGATCCAGCCTCAAGATACTATGCCTCATTCACATCTTGTGCACCCCAAATCCTCTGAAACCTGCAACATCAATGGATTTTCAATGATGTCATCATATCCAATGGCTGTTGGGTCTGGAGTGATTTCATTCCCGGGCAGGAATCAGGTGGAGAACCTCCCTCTGGGGCATGGAAATTATGAACGCAATGGTCCAATTCATTATGTTCCAGATCCAAAAGCTTCTGCTATGTTTGATGCTGCCTTGAGTTCAAGCTCTTCCGTTGATCTACCAACGCTGTCTCTTGGACTTTCCTTGTCGTCCGATCAGAGAAGAAAAACATCAAGGCACTCAAATTTACAGGCAGTGCCATGTTACAACAATGGAGAAGGCATCATAAGTGTTGCTTGA 888 0.4887 MSRSLSATSTDGGEASSPASAGEIMLFGVRVVVDSMRKSVSLNNLSQYEHPQDGSNNNKEDVLAAGYASVDDAVVHNSGKHRERERKRGVPWTEDEHRLFLLGLQKVGKGDWRGISRNYVKTRTPTQVASHAQKYFLRKCNLNRRRRRSSLFDMTTDSVSANPVEEQIQPQDTMPHSHLVHPKSSETCNINGFSMMSSYPMAVGSGVISFPGRNQVENLPLGHGNYERNGPIHYVPDPKASAMFDAALSSSSSVDLPTLSLGLSLSSDQRRKTSRHSNLQAVPCYNNGEGIISVA 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00102 295 PANTHER TRANSCRIPTION FACTOR KUA1 21 223 - -
Accr8g00102 295 CDD SANT 91 136 IPR001005 -
Accr8g00102 295 ProSiteProfiles Myb-like domain profile. 84 136 IPR001005 -
Accr8g00102 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 140 IPR017930 -
Accr8g00102 295 SMART sant 88 138 IPR001005 -
Accr8g00102 295 FunFam transcription factor MYB1R1 90 141 - -
Accr8g00102 295 Gene3D - 90 142 - -
Accr8g00102 295 NCBIfam myb-like DNA-binding domain, SHAQKYF class 87 139 IPR006447 GO:0003677
Accr8g00102 295 SUPERFAMILY Homeodomain-like 86 138 IPR009057 -
Accr8g00102 295 ProSiteProfiles SANT domain profile. 87 140 IPR017884 -
Accr8g00102 295 Pfam Myb-like DNA-binding domain 91 136 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00102 Accr-Chr8 1442745 1444385 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr8g00102 Myb_DNA-binding 2e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00102 - - qsa:O6P43_030925 335.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00102 8 1442745 1444385 Accr12g00607 12 5700935 5702457 CCT