Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00092 ATGTCACAACGATCTCCTTCTCCTCCTCTTGTTTCTAACGAACCCTCTAATCGATCCTCGCCTGAACCCAATTCTCAAGGCCATATATCTGATTCTCCCAACGACGTCGTTCCCGCTTCTAAGGAGGAAACGACTGCCGCTCCCGCCACTACCAGGAGCAACCGACCATCGCGCGCCTGCACCATTCGAGCTGCTTCTCGTCTCTATTCACCAACGCAGCCGGCAACTGGCCGGCGACTCAAAGGTTTGAAGAAGGAGCAGCGGCTGCCGGAGGACTGGCCGGAGAAACAGCAGCAATGTAGCAGTATTTTGACACCGCTTGTGGAATCACCATCACCTTCGCAGTTGCCTCGGCGGAACCTGAGGGCTATGTGGGAGTTAGCTTCTATACTCCATTTCTTTCATGTATTTAGGCCTCTTTTGAACATCTCAGCAGAATTCTCGGCCGAAGAGTTTGAGACAGCTCTCCTTACCCCCAATGACACATTGAGTGATATACATATTCCCTTACTAAAGGCAATCCCTCCCATTACACGAATGGCACTCACACGTGATACCTGGATAACCATATTATGCAGAAAATTGAGAAACTGGTGGCTATGGGTTGCGAACGGGGAACTTCCTATTGTTGCTTCACATGGACTGGAAATTGAGGCATACAAATCACTTGATCCTGGGACTCGTGTGATAATCTTAAAGGCATTATGTGACATTCGTGTTGAGCAAGAAGATATTCGAAGTTATATTGACAGCTCACTCAAACATGGTGTTCTACTTTCATCATTTCGTAAAGAGCGTATCGGGGGTGATTCACATGGAATTTTCTATTGGTATGAAGATGACCCCATAATTGGCCATAGGTTGTACCGGGAAGTTAGGAAAACTGAAGTCATTCAAATGAGGAAAGGGAAACCAAAAGGTTCCCGGGTCAATTCTAGTACAACATATCGGTGGGAAACGGTTGCTACTAATTTTGATGAATTTGTAGATGTCACCGATAAGCTTTTCTCAAGCAAAAACAAAACGGAGGTGTCATTAGGGAAGAAGTTGAAGATGGACATGCTTCCTGAGATCGAGAAAGTTCACAAGAAAAAAGAGCGGTTGCTGAAGAAGCAACAAAGAGAAGCTCTTCTTCTTGACACTTTCTTGGTTGTTGACGGGATTGGTCCTGGGCGTTCGCTTCGTGGTAGGAAACCTGTTACCTACACATTTGATGATTATGATCGGTCCATCAACGAGGCAATTAAGATGACAGCACAAAAACAACCATCCCCAGAGCCTATAACCAAGAGAGAAGTAGGAGAAAAACCTGAAGTTTTGACTAACGGTAGATTGAGTGGGCCTTCACATGCCTCTCAACGTCTGAGCTTTAGTGTACCATCTCCAAATTCACCTGACTTTGATGATACTGAGGAAGAGCTTATATCTGAACCACTGGATCGAAGCAGCAATCGACGAAGACAAAGACCTATGCGGTATTCAGAGAAAGAGTTTGTTCAAGCAGTTTCAGATAATGAGGCAGAATTTGATAGTGATGATGATATTGTTGGAGAAGCTGTGTATGATGATGAATATCTCAGGCAACGTAAGCAAAGAAAGGTTTCTAGTAGCTCCGAAGGAGATGAAGAATATCAATGGGATGAAGAAAATGTTGAAGAAGATGATCAGGAAGATTCATTAAGTATCAGTGAGGAAAGTGACCAACCGCGTAAATTCAAGCCATTGGCAGGCCGTACGAGGAGGGAAACTAAGCTCCAATCTGTTGGTGAGATCCAATCAGGTCTACGACGCAGTAAAAGGGTTACCAGAAACCCAATAAATTACAGACAATATGTGATGTCGGATTCAGAAACAGAATCTACAAAGCCGAAGAAGTCTAATGCTGCAGATGATCATTCAGATCCCAGTGAGAATGAGAATGGGGAGTATATGATGGAAACTGAAACAGAAGATTCGGATGTTGGCAAAGATGATGAAGAGCAAGAGGACGAACAGGAGATGAACCTGGATAAGCCAATTGATTTTCCTGTGCAGGAGAGAGAAAACCAGCCGCCCGAAAAACTAAACAGTCCCAGACAGGAGGAAGTTGAGGGCATGAACAAAAGACGCTTCCTTGATTTGAATGAGCTTGCCCCTAGCTCAGGTTTTGAAGATGGTCCCAACTCAATAATGAATGACGAAAACGATGATTACTGA 2196 0.4454 MSQRSPSPPLVSNEPSNRSSPEPNSQGHISDSPNDVVPASKEETTAAPATTRSNRPSRACTIRAASRLYSPTQPATGRRLKGLKKEQRLPEDWPEKQQQCSSILTPLVESPSPSQLPRRNLRAMWELASILHFFHVFRPLLNISAEFSAEEFETALLTPNDTLSDIHIPLLKAIPPITRMALTRDTWITILCRKLRNWWLWVANGELPIVASHGLEIEAYKSLDPGTRVIILKALCDIRVEQEDIRSYIDSSLKHGVLLSSFRKERIGGDSHGIFYWYEDDPIIGHRLYREVRKTEVIQMRKGKPKGSRVNSSTTYRWETVATNFDEFVDVTDKLFSSKNKTEVSLGKKLKMDMLPEIEKVHKKKERLLKKQQREALLLDTFLVVDGIGPGRSLRGRKPVTYTFDDYDRSINEAIKMTAQKQPSPEPITKREVGEKPEVLTNGRLSGPSHASQRLSFSVPSPNSPDFDDTEEELISEPLDRSSNRRRQRPMRYSEKEFVQAVSDNEAEFDSDDDIVGEAVYDDEYLRQRKQRKVSSSSEGDEEYQWDEENVEEDDQEDSLSISEESDQPRKFKPLAGRTRRETKLQSVGEIQSGLRRSKRVTRNPINYRQYVMSDSETESTKPKKSNAADDHSDPSENENGEYMMETETEDSDVGKDDEEQEDEQEMNLDKPIDFPVQERENQPPEKLNSPRQEEVEGMNKRRFLDLNELAPSSGFEDGPNSIMNDENDDY 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00092 731 Coils Coil 355 375 - -
Accr8g00092 731 MobiDBLite consensus disorder prediction 1 81 - -
Accr8g00092 731 PANTHER REMODELING AND SPACING FACTOR 1 51 696 IPR028938 GO:0006355|GO:0031213
Accr8g00092 731 MobiDBLite consensus disorder prediction 445 465 - -
Accr8g00092 731 MobiDBLite consensus disorder prediction 476 503 - -
Accr8g00092 731 Pfam DDT domain 129 174 IPR018501 -
Accr8g00092 731 MobiDBLite consensus disorder prediction 1 73 - -
Accr8g00092 731 MobiDBLite consensus disorder prediction 586 617 - -
Accr8g00092 731 MobiDBLite consensus disorder prediction 417 731 - -
Accr8g00092 731 MobiDBLite consensus disorder prediction 618 639 - -
Accr8g00092 731 MobiDBLite consensus disorder prediction 520 540 - -
Accr8g00092 731 MobiDBLite consensus disorder prediction 563 585 - -
Accr8g00092 731 MobiDBLite consensus disorder prediction 641 667 - -
Accr8g00092 731 MobiDBLite consensus disorder prediction 668 704 - -
Accr8g00092 731 MobiDBLite consensus disorder prediction 541 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00092 Accr-Chr8 1360593 1369523 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Accr8g00092 DDT 1.7e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00092 - - qsa:O6P43_022781 955.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00092 8 1360593 1369523 Accr12g00618 12 5773725 5780790 CCT
Accr8g00092 8 1360593 1369523 Accr8g00092 8 1360593 1369523 ECH