Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00086 ATGACCATTAAGGGTGGCACACCCCAGGCTTGTGCAGCTTGCAAATACCAGAGAAGAAAATGTACTTCTGAGTGCCTTCTTGCTCCATATTTCCCAGCAGAACAACCCAAGGTGTTTCAGAACGTGCACAAGCTATTTGGAGTGAGCAATATTAAAAAGATGTTGAAGAAACTTGATCTTAACCAGAAGAAAATAGCCATGGATTCAATTATTTGCCAAGCAAATATTAGGGAAAAGTACCCTGTACATGGCTGCTGTGAGGAAATTTCCAGGCTCCATTACCAGATTTGGCGTATGGAAGAGGAACGTCAAGCTGTTCATCAGCAACTTGAGATTTTCAAGCAATATTACCAGCATCATCATCATCAACTTCCTGAACAATTAGAGTTGGGTATAACACCTTGTTCCAATAATAATGGCCTCCAACTGTTTGATCCAATGCCTCAACCACAAGATTACAACAATTTAGTGGCTGCAACATCTTTGCCTATGTCTCAGCATCATCATCAGCAACATGAGGCTTATGATAATTCCCTTTACATTGATTCTAAGGATGGTGTCCCAACTCTTATGTGGGCTGAACATCCATATGATGGTGATAATAGCTGTTCCATGTCAAAGCAGCCTCAAATGGATGCCTCACAGCAGCCACTAGTCATTGAACAAGAAGTTACTGAAGATTATGATGAGATTCATCCGTTTTTTGATGCTATTCATGATAGACAATCGTACTTTTATTCTAAGGAGGCTTATGAGTCAAGTTCTGAAGAATCGTTGAAAGATACGCCGAAGTGCACGGAACATGTTGCTGAGAATGAATTGAAGAATGCTGCTGCATGCTTTAGTCTTACCAGTGTCAACTGA 864 0.4074 MTIKGGTPQACAACKYQRRKCTSECLLAPYFPAEQPKVFQNVHKLFGVSNIKKMLKKLDLNQKKIAMDSIICQANIREKYPVHGCCEEISRLHYQIWRMEEERQAVHQQLEIFKQYYQHHHHQLPEQLELGITPCSNNNGLQLFDPMPQPQDYNNLVAATSLPMSQHHHQQHEAYDNSLYIDSKDGVPTLMWAEHPYDGDNSCSMSKQPQMDASQQPLVIEQEVTEDYDEIHPFFDAIHDRQSYFYSKEAYESSSEESLKDTPKCTEHVAENELKNAAACFSLTSVN 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00086 287 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Accr8g00086 287 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Accr8g00086 287 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00086 Accr-Chr8 1313797 1314773 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00086 1 114 AS2 family AT3G47870 60.526 2.88e-45 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Accr8g00086 LOB 1.4e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00086 - - lang:109357116 330.872