Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00082 ATGGGCATGGATTACTATAACATACTGAAGGTGAATCGAAATGCGAGTGAGGACGATTTGAAGAAGGCCTACAAGAGGCTAGCGATGATTTGGCACCCAGACAAAAACCTTGTTAACAAGAGGGAAGCTGAGGCCAAATTCAAGCAAATTTCCGAAGCCTTTGACGTTTTGAGCGATCCCCAAAAGCGTCAGATCTATGATCTCTACGGCGAGGAGGCCCTCAAGTCTGGTCAGTTCCCGCCACCTCCGCAATCCTCTTCTTCCATGTCCTCCTCGTCTTCTCGTGCTTACCGGCATTTCCAAAACCAACAACGCCAGCATAGCAACACGTCTTACCGGTTTAATCCTAGGGATGCCGATGACATTTACGCGGAAATTTTTGGGTCGGAGAATGGTGGTACTGGTGGTGGAGGTGGGAGGAATGGTGCGCATAGGGACGGGTTTTTTAGAACTTCAAATGGCGCGTTTGGTGGAGGGAGTAGGAAGGCTGCGGCAGTGGAGACTCCTTTGCCGTGTAGCTTGGAAGAGCTCTACAAAGGTGTCAAGAAGAAGATGAGGATCTCAAGGAATGTCTGTGACGCTTCTGGGAAGTCTTGGAATGTGGAGGAGATATTGACTATTGAGGTGAAACCTGGTTGGAAGAAAGGAACAAAGATTACTTTCCCTGATAAGGGTAACCAGGAGCCTGGTGTCATTGCAGCAGATCTTATATTTGTGTTGGATGAGAAACCCCATGCTGTTTATAGGAGGGATGGTAATGACCTGGTGATCAACCAAGAGATTACTCTTCTAGAGTCCCTTACAGGTAAAACCCTAGACCTCACTACCTTAGATGGAAGGAATATCATGATCCCACTGACCGATATTGTCAAACCTGGCGGTGAGGTCGTTGTCCCTAATGAGGGAATGCCCATTTCAAAAGAGCCTGGGAAGAAGGGCAATTTGAGGATTAAGTTTGAGGTTAAGTACCCTTCGAGGTTAACTCCAGAGCAGAAATCTGAGCTGATAAGGGTTTTGGGTGGGAATGGAAATACAAATGTTTGA 1044 0.4722 MGMDYYNILKVNRNASEDDLKKAYKRLAMIWHPDKNLVNKREAEAKFKQISEAFDVLSDPQKRQIYDLYGEEALKSGQFPPPPQSSSSMSSSSSRAYRHFQNQQRQHSNTSYRFNPRDADDIYAEIFGSENGGTGGGGGRNGAHRDGFFRTSNGAFGGGSRKAAAVETPLPCSLEELYKGVKKKMRISRNVCDASGKSWNVEEILTIEVKPGWKKGTKITFPDKGNQEPGVIAADLIFVLDEKPHAVYRRDGNDLVINQEITLLESLTGKTLDLTTLDGRNIMIPLTDIVKPGGEVVVPNEGMPISKEPGKKGNLRIKFEVKYPSRLTPEQKSELIRVLGGNGNTNV 347
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00082 347 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Accr8g00082 347 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 3 339 - -
Accr8g00082 347 FunFam Dnaj homolog subfamily b member 162 243 - -
Accr8g00082 347 SUPERFAMILY HSP40/DnaJ peptide-binding domain 248 334 IPR008971 GO:0006457|GO:0051082
Accr8g00082 347 FunFam DnaJ subfamily B member 13 245 325 - -
Accr8g00082 347 CDD DnaJ 4 59 IPR001623 -
Accr8g00082 347 MobiDBLite consensus disorder prediction 74 115 - -
Accr8g00082 347 Gene3D - 245 325 - -
Accr8g00082 347 Pfam DnaJ C terminal domain 166 324 IPR002939 -
Accr8g00082 347 Gene3D - 164 243 - -
Accr8g00082 347 Gene3D DnaJ domain 2 141 IPR036869 -
Accr8g00082 347 PRINTS DnaJ domain signature 24 39 IPR001623 -
Accr8g00082 347 PRINTS DnaJ domain signature 62 81 IPR001623 -
Accr8g00082 347 PRINTS DnaJ domain signature 6 24 IPR001623 -
Accr8g00082 347 PRINTS DnaJ domain signature 42 62 IPR001623 -
Accr8g00082 347 SMART dnaj_3 3 62 IPR001623 -
Accr8g00082 347 MobiDBLite consensus disorder prediction 79 115 - -
Accr8g00082 347 CDD DnaJ_C 166 327 - -
Accr8g00082 347 SUPERFAMILY HSP40/DnaJ peptide-binding domain 167 245 IPR008971 GO:0006457|GO:0051082
Accr8g00082 347 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Accr8g00082 347 MobiDBLite consensus disorder prediction 127 146 - -
Accr8g00082 347 FunFam DnaJ subfamily B member 13 3 137 - -
Accr8g00082 347 Pfam DnaJ domain 4 67 IPR001623 -
Accr8g00082 347 SUPERFAMILY Chaperone J-domain 3 90 IPR036869 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Accr8g00082 Accr-Chr8 1253892 1257707 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00082 5 74 C2H2 Transcription Factor Family AT1G74250 35.135 9.89e-10 58.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00082 K09510 - qsa:O6P43_022791 528.094