Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00066 ATGGATTTGCAGAGCGGGCTTCCTCTGCTTTCTCAACAATACACATCCCTTTTGAAGAAGAACTTCTTGCTCTCATGGCGGAACAGGAAGGCTTCGTTTCTCCAACTTCTCTCTCCTATCTTCTTCATGTTCCTTTTGTTCGTCATTGATAAGGCCTTTCAGGCTCGCTACTCCTCGTCTACGGCTAATAAGAGCGTCACCGATCCCGGTACTTTGATCTCTCCGCCCATTACTCCCTGCGAGGAAAAGTTCTTCGTTAAGCTTCCTTGCTATGATTTTGTTTGGAGCGGAAATGGAAATCCCAAATTTCAGACCATTGTCAGCCGTATCATGGCTAATAACCCCGGCCGAACCATACCTCCCTCTAAGGTTCTATCCTTTAGCAATGCAGCTGAAGTGGATGATTGGCTTTTCAAGAATCCTTTGCGTTGTCCTGGTGCCCTGCATTTCACCGAAAAAAATGCCACAGTCATTAGCTATGGTGTGCAGACAAATTCAACCTCTATTTTAAACCGAGGGCACTACGAAGACCCCACTTTTGCATTTCAGCTCCCACTTCAGCTAGCTGCGGAGCGGGAAATTGCTAGATACTTGATTGGAGACCCATCCTTCAGCTGGAGCTTTTCTTTCAAAGAATTCGCACACCCTGCCATAGAATCTTTCTCTGTAGTTGGGTCAATAGGTCCATCATTTTTCCTTTCAATCGCCATGTTTAACTTTGTTCTTCAGATGGACTCTTTGGTGGCAGAAAAAGAAAATAAACTTCGTCAGGCAATGAAGATGATGGGCCTATATGACTCCGCATACTGGTTATCCTGGCTTACCTGGGAGGCAGTTATTACACTTATATCATCACTTCTCATAGTTCTTTCCGGAATGATGTTTCAATTTCATTTTTTCCTGAAAAACAATTTTGCAGTCGTGTTTCTTCTGTTTTTCCTTTTTGAACTCAGCATGACGGGATTTGCGTTCATGTTATCTGCCTTCATTCGTGAATCATCTTCGTCCAACACAATAGGATTCTTTGGATTTATTGTCGGCATTTTGACTCAGGGCTTTGTACAAGCAGGATATCCATATGAGCATGATACCTCCAAGGCTTTCCGAGCTATCTGGTCACTTTTCCCACCAGATCCATTTGCTCAAGGTATACATTTGCTTTCACAAGCAACTTCCACTCCTGAAGACAATGGTGTTAGATGGAGTAAACGGGGAGAATGTGCTCCAAACGACGATACAAACGACGGTGGTTGTTTCGTAACAATTAATGATCTCTACATGTGGCTGTTGGGTACATTCTTTCTGTGGTTTATTCTGGCTATCTACTTTGATAACATAATCCCAAATGCCTCTGGTGTGAGGAAATCAGTCTTCTACTTCCTAAATCCCAGATATTGGATTGGAAAAGGAGGAGATAAAGTGAGAGAGGGTGGGGTTTGTAGCTGTGTAGGTTCAGTCCCGCCACAAGAGAATATCACACCGGATGATGAAGATGTCCTTGAAGAGGAAAATATTGTAAAGCAGCAAGCAGCAGAATGTATGGTAGACCCAAATGTCGCTGTTCAGATACGTGGCCTTGCAAAGACATATCCTGGTGCATTGAACATTGGTTGCTGCCGTAAATGCAAAAGAACTGCTGCTTTCAATGCTGTTAAGGGCTTATGGGTAAATTTTGCAAAGGATCAGTTGTTTTGTCTTCTTGGACCCAATGGAGCTGGGAAAACTACTGTTATTAATTGTTTGACTGGGATAACTCCAGTTACTGGTGGAGATGCATTGATATATGGACATTCTATAAGAAGCTCCACTGGCATGTCGAACATTCAAAAGCTTATAGGTGTCTGTCACCAGTTTGATATCTTATGGGATGCATTGTCTGGTGAAGAACACCTCCATCTCTTCGCAACCATTAAAGGGCTTCCCCCTTCTTATATCAAATCAATTACTCAGAAGTCATTAGCAGAAGTGAGACTCACAGAGTCAGCCAAAGTGAGAGCTGGAAGTTACAGTGGGGGAATGAAACGACGTCTTAGTGTTGCCATTTCCCTTATTGGTGATCCTAAGCTAATCATTTTGGATGAACCGACAACAGGCATGGATCCAATAACAAGGAGGCATGTGTGGGACATAATAGAGAATGCAAAACGGGGGCGAGCCATTGTCCTCACAACACACTCCATGGAAGAGGCTGACATTCTAAGCGACCGCATAGGAATCATGGCAAAAGGAAGACTTCGCTGCATTGGCACCTCAATACGGTTGAAGTCACGTTTTGGTACCGGTTTTATAGCTAATATCAGCTTCCATGGAAACAAACTTGAACAAAGTCCAGCTAATTCAGATGCAACTTCTACAAGAAATCATGAGACAGTGAAGCAATTCTTTAAGAATAATTTAGATGTGGTACCAAAAGAAGAGAAGAGTGCCTACTTAACTTATGTGATTCCTCATGATAGAGAGGGACTCTTGATGAATTTTTTTGAGGAACTCCAAAATAGAGAAGAAGAATTTGGAATATCCGACATCCATCTTGGTCTTACAACTCTTGAAGAGGTTTTCTTGAATATTGCAAGACAAGCAGAGCTTGAAAGTGCTGCAGCTGAAGGGAGCTTGACCACGCTGACGTTGACTTCAGGAGAATCTGTTAAGATACCTGTGGGAGCAAGGTTTGTGGGGATTCCAGGAACTGAATCTGCTGAAAATCCCAGAGGGATAATGGTAGAAGTATATTGGGAACAAGATGATTCTGGTGCCCTCTGCATTGCTGGTCACTCACGCCAAGTTCCTCTACCTCCCACTGTTGAACTACCTGCTCGTCCACCCTTAACAAGACGTCGAAGCCTCAGGCGACGGTCAGAGGTAGTTGATGGGATTGTGATTGAACCCAGTCAAGTTAATACCGTCAATTTCTAG 2913 0.4339 MDLQSGLPLLSQQYTSLLKKNFLLSWRNRKASFLQLLSPIFFMFLLFVIDKAFQARYSSSTANKSVTDPGTLISPPITPCEEKFFVKLPCYDFVWSGNGNPKFQTIVSRIMANNPGRTIPPSKVLSFSNAAEVDDWLFKNPLRCPGALHFTEKNATVISYGVQTNSTSILNRGHYEDPTFAFQLPLQLAAEREIARYLIGDPSFSWSFSFKEFAHPAIESFSVVGSIGPSFFLSIAMFNFVLQMDSLVAEKENKLRQAMKMMGLYDSAYWLSWLTWEAVITLISSLLIVLSGMMFQFHFFLKNNFAVVFLLFFLFELSMTGFAFMLSAFIRESSSSNTIGFFGFIVGILTQGFVQAGYPYEHDTSKAFRAIWSLFPPDPFAQGIHLLSQATSTPEDNGVRWSKRGECAPNDDTNDGGCFVTINDLYMWLLGTFFLWFILAIYFDNIIPNASGVRKSVFYFLNPRYWIGKGGDKVREGGVCSCVGSVPPQENITPDDEDVLEEENIVKQQAAECMVDPNVAVQIRGLAKTYPGALNIGCCRKCKRTAAFNAVKGLWVNFAKDQLFCLLGPNGAGKTTVINCLTGITPVTGGDALIYGHSIRSSTGMSNIQKLIGVCHQFDILWDALSGEEHLHLFATIKGLPPSYIKSITQKSLAEVRLTESAKVRAGSYSGGMKRRLSVAISLIGDPKLIILDEPTTGMDPITRRHVWDIIENAKRGRAIVLTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFIANISFHGNKLEQSPANSDATSTRNHETVKQFFKNNLDVVPKEEKSAYLTYVIPHDREGLLMNFFEELQNREEEFGISDIHLGLTTLEEVFLNIARQAELESAAAEGSLTTLTLTSGESVKIPVGARFVGIPGTESAENPRGIMVEVYWEQDDSGALCIAGHSRQVPLPPTVELPARPPLTRRRSLRRRSEVVDGIVIEPSQVNTVNF 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00066 970 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 496 863 IPR026082 GO:0016020|GO:0055085|GO:0140359
Accr8g00066 970 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 521 767 IPR003439 GO:0005524
Accr8g00066 970 FunFam ABC transporter A family member 2 511 775 - -
Accr8g00066 970 ProSitePatterns ABC transporters family signature. 669 683 IPR017871 GO:0005524|GO:0016887
Accr8g00066 970 CDD ABC_subfamily_A 521 755 - -
Accr8g00066 970 Pfam ABC transporter 554 696 IPR003439 GO:0005524
Accr8g00066 970 Gene3D - 509 799 IPR027417 -
Accr8g00066 970 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 543 749 IPR027417 -
Accr8g00066 970 SMART AAA_5 560 744 IPR003593 GO:0016887
Accr8g00066 970 Pfam ABC-2 family transporter protein 32 442 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00066 Accr-Chr8 994173 1000005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00066 564 786 Calmodulin-binding Proteins AT2G36910 22.650 4.57e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00066 - - gmx:100786538 1434.47