Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00060 ATGGAGGTTGCTTTAGGAAGATCTGATCATGAAAGTAGAGTCAAACAAGAGAAGACAACTGAATCCGGTGGCCCTGGCCATGGTGATGAAGATCATCCAAAACAAGAGATTGATATTGAGGTGGAAGAGCTAGAAAGTGCAAAAACGGAAATGGGAGAGGCGAGAGAAGAAAACCAAAGGCTGAAGCAGTGTTTGGATAGAGTTATGAAGGATTACAGGACACTTGAAATGAAATTCAAAGATATCTTTCAAAAAGAAACCAAACATCAATCCACTACTACTTGTTCTGAACCTGATGATTTAGTTTCTCTGAGCCTTGGAAGAGTTATTTGCAGCAATAACAACAATAATAATGCAAGAACTAGCGATGATGATGATCACCAGAAAAGAAAAGCTTTAAAAGCATTATTATTGAAGGATAATAATGGTGAGGATGAAGAAGACGACTTGGCTCTTGGATTGGACTGCAAATTTGAAACATCCAAGTCAGGAAGCATAACTAATAATTCTCCAAATATAATGAATCCAAGCCCTACCAATAGTTCTCATCAAGAGCCAGTCAATAATGAAAGTAAAGCACTCAAGACAAGCAGAGATAGTTATTCTGGAGAAGACGAAGTTTCCCAACACAATCCTCCCAAGAGAGCTAGGGTTTGTGTCAGAGCAAGATGTGACGCTCCAACTATGAACGATGGATGTCAATGGAGAAAATATGGCCAAAAAATCTCTAAAGGAAATCCTTGTCCTAGAGCATATTATCGTTGTACAGTCGCACCCTCATGCCCCGTGAAAAAACAGGTGCAAAGATGTGCAGAGGATATGTCGGTTTTAGTTACAACTTATGAGGGAATCCACAACCACCCTCTTCCTCTCTCAGCCACCGCCATGGCTTCCACTACTTCCGCTGCGGCTTCCATGCTTTTGTCTGCTTCATCATCGTCTTCTTCCGCCGCCGCTGCATCTGCCACCACTCCATTATATTTTTCCAATAATCCTTCTTCACTCTCATCATCATCATCATTGCCTTCTCACCCAACAATCACTCTTGACCTCACCACTAACTCAGCAGCCTCCAGATTCTTCATGACCTCATCATCGTCGTCATCAAATTACAACCCTCCTCCAAGATCATCATCATTCCGTTCTTCTACAAGTCTCAACTTTAGTTCCCCAGACAATAATAACTTTCTCAGCTATAACAGTAATAACAGGAATATTTTCAGCTCCATGAACCTTGCAAGGTCGACAGCAATGGATAATAATATCTACAGGCTGCCTTACGTGCAAAAGAACAGTGTTATCAATAACCCAACTCATCATCATGCTCCTCCTCAACCAGCTGGTCTGCCGGATAGTATTGCGGCCGCCACCAAGGCCATCGCGGCGGACCCGAAGTTTCAGTCGGCTTTGGCGGTGGCACTTAGTTCATTTATTGGCACAGGAGGAAGTGGCATTGGAAGCAGCAGCCAAGGCCAAGGAAATCGTGGCGGCGCCGGAGAAAACTTGCCTCAGAAAGTGAAATGGGGAGAGCTGTTTCCAGCATTATGA 1548 0.4341 MEVALGRSDHESRVKQEKTTESGGPGHGDEDHPKQEIDIEVEELESAKTEMGEAREENQRLKQCLDRVMKDYRTLEMKFKDIFQKETKHQSTTTCSEPDDLVSLSLGRVICSNNNNNNARTSDDDDHQKRKALKALLLKDNNGEDEEDDLALGLDCKFETSKSGSITNNSPNIMNPSPTNSSHQEPVNNESKALKTSRDSYSGEDEVSQHNPPKRARVCVRARCDAPTMNDGCQWRKYGQKISKGNPCPRAYYRCTVAPSCPVKKQVQRCAEDMSVLVTTYEGIHNHPLPLSATAMASTTSAAASMLLSASSSSSSAAAASATTPLYFSNNPSSLSSSSSLPSHPTITLDLTTNSAASRFFMTSSSSSSNYNPPPRSSSFRSSTSLNFSSPDNNNFLSYNSNNRNIFSSMNLARSTAMDNNIYRLPYVQKNSVINNPTHHHAPPQPAGLPDSIAAATKAIAADPKFQSALAVALSSFIGTGGSGIGSSSQGQGNRGGAGENLPQKVKWGELFPAL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00060 515 MobiDBLite consensus disorder prediction 484 503 - -
Accr8g00060 515 SMART WRKY_cls 229 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr8g00060 515 MobiDBLite consensus disorder prediction 163 215 - -
Accr8g00060 515 ProSiteProfiles WRKY domain profile. 224 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Accr8g00060 515 SUPERFAMILY WRKY DNA-binding domain 222 290 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr8g00060 515 Gene3D WRKY domain 214 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Accr8g00060 515 MobiDBLite consensus disorder prediction 163 196 - -
Accr8g00060 515 FunFam probable WRKY transcription factor 31 214 291 - -
Accr8g00060 515 MobiDBLite consensus disorder prediction 1 38 - -
Accr8g00060 515 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 21 487 IPR044810 GO:0003700
Accr8g00060 515 MobiDBLite consensus disorder prediction 363 385 - -
Accr8g00060 515 Coils Coil 37 71 - -
Accr8g00060 515 MobiDBLite consensus disorder prediction 197 212 - -
Accr8g00060 515 Pfam WRKY DNA -binding domain 230 288 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00060 Accr-Chr8 875869 879081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00060 51 352 WRKY Transcription Factor Family AT5G15130 47.335 3.65e-71 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Accr8g00060 WRKY 3.1e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00060 - - pcin:129309271 505.368