Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00055 ATGGGGAAGTCACCGGGAAAATGGATCAAAACAGTGCTATTTAGGAAAAAGTCATCCAAATCAAATATTTCAAAAGCAAGAGAAAAACTTGTTACACAGAAAGAATCGCCGGTTGCTCCCAAGGCATCAGAAACTGAGTTCTCTTTCAATCCAACACCCATTACTTTTCCTAGAAATGAGAGGGATGCAGAACTGGAAAATAAGGATCTAGAACATCTTTTGCTGCAGAATCAAGCTGATATTTCTGGATCTGATCATCAAGATGCCCCTCTTGATCTGGATAGAATTATGCAGGAGGAAGCTACAACAAAGGTGCAGTCTACTATACCTTCCGATTTAGAGAAAAATAAGCAGGAGGAAGCTGCAATGACCATGCAGGTTACTTTACCTCCTGATCTAGACAAAATTAAGCAGGAGGAAGCTGCAATAAAGGTGCAAGCTACTTGCAGGGGCTATTTGGCTCGCAGGGCGTTCATGACTCTTAAAGGCATAATAAGGTTGCAAGCACTTATCCGAGGGCACTTGGTTAGGAGACAAGCTATTTCTACTTTATGTTGTATGTATGGGACCATCAAGATACAAGCACTAGTTCGTGGTCGAAGAGTTAGGCAGTCTGAAGTTGGGTATGACATGCATGGGAAGTGCAATGTTGTGAAGCATCAGGTTGACAAGTGCGGCAACTCAGTTGGGTTAACTGCAAAAATTGCAAATATGTCAGCAAATAGTTTTATCCGCAAGCTTCTTGCTTCATCAACTGCAACAACTGCTTTGCATCTTCAATATCCTTCTGGTGATCCGAATGCAGTTCTAAGTTGGTTGGTGCGCTGGTCGGCGTCTCATTTTTGGAAACCAGTTCCCAAACCCAAGAAACGCCTAGACTCTAAATCTCAGAGAAAGATTGGTAATATTTCAAATGGAGATGCTCAAACGAGCAAGCCAAAACGTAGTAACTGGAAGATTCCTTCTTCGAGTTCAGACTTGGTCTTAGTGCAAGAAAGTTCTGACTTTGAGAAACTGAAACGAAACCTGGGAAAAGTTTCAAGCAAGCCCACAGATACAGTGGAGGAAAATTCAGAATATGAGTTTGAGAAGGTTAAGCGTAACTTGAGAAAGGTTCATAACCCTGTTGCAGAGAATTCTGCCCAGCCAGAAGTTGAATCAAAGACTGTGAAGCAGCATTCAGAAAAGGCATCAGTTACCTCAGGTTATGATGTTGAAGAAGAGGTCAAAACTAGTTACAATGAGAAGATAAAAATTGATTCAACATTGACCATGTCCAATGAGCCTGATGGAGATGGTAAACTTAGAATTTCAGTTGGGAAGAAGGCTTCTAACATGCTCAATACTCAAGTGCCTACTGATTCGGTGCCCTTGAGAGAGAATACAAGTAGAAGTAAGAACAATTCTGGTGAAGAAGCTACCAAAGAGCTAAAAGATTCACAGGAGATTTGGAATGATGAACATTCTCCCTTAACAAACGGACATTTGAGTCTTAAGGAAGATTTGACAAGAAATGAAAACCAGAAACCGGGTCGGAAATCCCCAGTTCTAGCTAAGCAGAAACTTGTTGTAGAAGATGGTTCACAGAATAGCCCAAGTCCCACTTTACCGAGTTACATGGCGGCTACTGAATCTGCGAAGGCAAAGTTGAGAGCACAAGGGTCCCCAAGGTTAGGACAAGATAGTGGAGGTGAGAGAAGCAACCTTACCAGGCGACATTCTCTGCCATCTTTGAATAACGGTAAGATTAGTTCGCATTCGCCAAGAACACACAGACCAGCTCAAGCAGGAGGAAAAAAAGGACATAGGAGTGGCAAAACAAACAAAACAATGGGTTCTTCCACAGATGGAAAGTCAACTCAAGCAGAGTGGAGGAGGTGA 1881 0.4232 MGKSPGKWIKTVLFRKKSSKSNISKAREKLVTQKESPVAPKASETEFSFNPTPITFPRNERDAELENKDLEHLLLQNQADISGSDHQDAPLDLDRIMQEEATTKVQSTIPSDLEKNKQEEAAMTMQVTLPPDLDKIKQEEAAIKVQATCRGYLARRAFMTLKGIIRLQALIRGHLVRRQAISTLCCMYGTIKIQALVRGRRVRQSEVGYDMHGKCNVVKHQVDKCGNSVGLTAKIANMSANSFIRKLLASSTATTALHLQYPSGDPNAVLSWLVRWSASHFWKPVPKPKKRLDSKSQRKIGNISNGDAQTSKPKRSNWKIPSSSSDLVLVQESSDFEKLKRNLGKVSSKPTDTVEENSEYEFEKVKRNLRKVHNPVAENSAQPEVESKTVKQHSEKASVTSGYDVEEEVKTSYNEKIKIDSTLTMSNEPDGDGKLRISVGKKASNMLNTQVPTDSVPLRENTSRSKNNSGEEATKELKDSQEIWNDEHSPLTNGHLSLKEDLTRNENQKPGRKSPVLAKQKLVVEDGSQNSPSPTLPSYMAATESAKAKLRAQGSPRLGQDSGGERSNLTRRHSLPSLNNGKISSHSPRTHRPAQAGGKKGHRSGKTNKTMGSSTDGKSTQAEWRR 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00055 626 SMART iq_5 137 159 IPR000048 GO:0005515
Accr8g00055 626 SMART iq_5 160 181 IPR000048 GO:0005515
Accr8g00055 626 MobiDBLite consensus disorder prediction 441 626 - -
Accr8g00055 626 MobiDBLite consensus disorder prediction 465 485 - -
Accr8g00055 626 MobiDBLite consensus disorder prediction 285 323 - -
Accr8g00055 626 MobiDBLite consensus disorder prediction 524 540 - -
Accr8g00055 626 MobiDBLite consensus disorder prediction 560 591 - -
Accr8g00055 626 MobiDBLite consensus disorder prediction 298 323 - -
Accr8g00055 626 MobiDBLite consensus disorder prediction 24 56 - -
Accr8g00055 626 Pfam IQ calmodulin-binding motif 162 179 IPR000048 GO:0005515
Accr8g00055 626 Pfam IQ calmodulin-binding motif 140 158 IPR000048 GO:0005515
Accr8g00055 626 PANTHER IQ-DOMAIN 5-RELATED 1 584 - -
Accr8g00055 626 Pfam Protein of unknown function (DUF4005) 514 604 IPR025064 -
Accr8g00055 626 MobiDBLite consensus disorder prediction 442 464 - -
Accr8g00055 626 ProSiteProfiles IQ motif profile. 162 184 IPR000048 GO:0005515
Accr8g00055 626 MobiDBLite consensus disorder prediction 379 403 - -
Accr8g00055 626 ProSiteProfiles IQ motif profile. 138 166 IPR000048 GO:0005515
Accr8g00055 626 Gene3D - 136 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00055 Accr-Chr8 801283 805255 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00055 1 626 IQD Protein Family AT1G74690 38.871 5.67e-102 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00055 - - pcin:129309270 842.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00055 8 801283 805255 Accr12g00656 12 6164626 6168594 ECH
Accr8g00055 8 801283 805255 Accr8g00055 8 801283 805255 ECH