Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00054 ATGGGGAAGTCACCGGGAAAATGGATCAAAACAGTGCTATTTAGGAAAAAGTCATCCAAATCAAATATTTCAAAAGCAAGAGAAAAACTTGTTACACAGAAAGAATCGCCGGTTGCTCCCAAGGCATCAGAAACTGAGTTCTCTTTCAATCCAACACCCATTACTTTTCCTAGAAATGAGAGGGATGCAGAACTGGAAAATAAGGATCTAGAACATCTTTTGCTGCAGAATCAAGCTGATATTTCTGGATCTGATCATCAAGATGCCCCTCTTGATCTGGATAGAATTATGCAGGAGGAAGCTACAACAAAGGTGCAAGCTACTTGCAGGGGCTATTTGGCTCGCAGGGCGTTCATGACTCTTAAAGGCATAATAAGGTTGCAAGCACTTATCCGAGGGCACTTGGTTAGGAGACAAGCTATTTCTACTTTATGTTGTATGTATGGGACCATCAAGATACAAGCACTAGTTCGTGGTCGAAGAGTTAGGCAGTCTGAAGTTGGGTATGACATGCATGGGAAGTGCAATGTTGTGAAGCATCAGGTTGACAAGTGCGGCAACTCAGTTGGGTTAACTGCAAAAATTGCAAATATGTCAGCAAATAGTTTTATCCGCAAGCTTCTTGCTTCATCAACTGCAACAACTGCTTTGCATCTTCAATATCCTTCTGGTGATCCGAATGCAGTTCTAAGTTGGTTGGTGCGCTGGTCGGCGTCTCATTTTTGGAAACCAGTTCCCAAACCCAAGAAACGCCTAGACTCTAAATCTCAGAGAAAGATTGGTAATATTTCAAATGGAGATGCTCAAACGAGCAAGCCAAAACGTAGTAACTGGAAGATTCCTTCTTCGAGTTCAGACTTGGTCTTAGTGCAAGAAAGTTCTGACTTTGAGAAACTGAAACGAAACCTGGGAAAAGTTTCAAGCAAGCCCACAGATACAGTGGAGGAAAATTCAGAATATGAGTTTGAGAAGGTTAAGCGTAACTTGAGAAAGGTTCATAACCCTGTTGCAGAGAATTCTGCCCAGCCAGAAGTTGAATCAAAGACTGTGAAGCAGCATTCAGAAAAGGCATCAGTTACCTCAGGTTATGATGTTGAAGAAGAGGTCAAAACTAGTTACAATGAGAAGATAAAAATTGATTCAACATTGACCATGTCCAATGAGCCTGATGGAGATGGTAAACTTAGAATTTCAGTTGGGAAGAAGGCTTCTAACATGCTCAATACTCAAGTGCCTACTGATTCGGTGCCCTTGAGAGAGAATACAAGTAGAAGTAAGAACAATTCTGGTGAAGAAGCTACCAAAGAGCTAAAAGATTCACAGGAGATTTGGAATGATGAACATTCTCCCTTAACAAACGGACATTTGAGTCTTAAGGAAGATTTGACAAGAAATGAAAACCAGAAACCGGGTCGGAAATCCCCAGTTCTAGCTAAGCAGAAACTTGTTGTAGAAGATGGTTCACAGAATAGCCCAAGTCCCACTTTACCGAGTTACATGGCGGCTACTGAATCTGCGAAGGCAAAGTTGAGAGCACAAGGGTCCCCAAGGTTAGGACAAGATAGTGGAGGTGAGAGAAGCAACCTTACCAGGCGACATTCTCTGCCATCTTTGAATAACGGTAAGATTAGTTCGCATTCGCCAAGAACACACAGACCAGCTCAAGCAGGAGGAAAAAAAGGACATAGGAGTGGCAAAACAAACAAAACAATGGGTTCTTCCACAGATGGAAAGTCAACTCAAGCAGAGTGGAGGAGGTGA 1761 0.4236 MGKSPGKWIKTVLFRKKSSKSNISKAREKLVTQKESPVAPKASETEFSFNPTPITFPRNERDAELENKDLEHLLLQNQADISGSDHQDAPLDLDRIMQEEATTKVQATCRGYLARRAFMTLKGIIRLQALIRGHLVRRQAISTLCCMYGTIKIQALVRGRRVRQSEVGYDMHGKCNVVKHQVDKCGNSVGLTAKIANMSANSFIRKLLASSTATTALHLQYPSGDPNAVLSWLVRWSASHFWKPVPKPKKRLDSKSQRKIGNISNGDAQTSKPKRSNWKIPSSSSDLVLVQESSDFEKLKRNLGKVSSKPTDTVEENSEYEFEKVKRNLRKVHNPVAENSAQPEVESKTVKQHSEKASVTSGYDVEEEVKTSYNEKIKIDSTLTMSNEPDGDGKLRISVGKKASNMLNTQVPTDSVPLRENTSRSKNNSGEEATKELKDSQEIWNDEHSPLTNGHLSLKEDLTRNENQKPGRKSPVLAKQKLVVEDGSQNSPSPTLPSYMAATESAKAKLRAQGSPRLGQDSGGERSNLTRRHSLPSLNNGKISSHSPRTHRPAQAGGKKGHRSGKTNKTMGSSTDGKSTQAEWRR 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00054 586 PANTHER IQ-DOMAIN 5-RELATED 1 544 - -
Accr8g00054 586 MobiDBLite consensus disorder prediction 520 551 - -
Accr8g00054 586 MobiDBLite consensus disorder prediction 425 445 - -
Accr8g00054 586 MobiDBLite consensus disorder prediction 401 586 - -
Accr8g00054 586 MobiDBLite consensus disorder prediction 484 500 - -
Accr8g00054 586 Pfam IQ calmodulin-binding motif 122 139 IPR000048 GO:0005515
Accr8g00054 586 Pfam IQ calmodulin-binding motif 100 118 IPR000048 GO:0005515
Accr8g00054 586 MobiDBLite consensus disorder prediction 24 56 - -
Accr8g00054 586 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Accr8g00054 586 SMART iq_5 120 141 IPR000048 GO:0005515
Accr8g00054 586 SMART iq_5 97 119 IPR000048 GO:0005515
Accr8g00054 586 Gene3D - 97 144 - -
Accr8g00054 586 Pfam Protein of unknown function (DUF4005) 474 564 IPR025064 -
Accr8g00054 586 MobiDBLite consensus disorder prediction 258 283 - -
Accr8g00054 586 MobiDBLite consensus disorder prediction 402 424 - -
Accr8g00054 586 ProSiteProfiles IQ motif profile. 122 144 IPR000048 GO:0005515
Accr8g00054 586 MobiDBLite consensus disorder prediction 247 283 - -
Accr8g00054 586 MobiDBLite consensus disorder prediction 339 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00054 Accr-Chr8 801283 805255 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00054 1 586 IQD Protein Family AT1G74690 40.032 1.25e-104 326
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00054 - - pcin:129309270 774.237