Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00053 ATGGCGGATGCACCGAGGGGCTCTTCCACCTTCTGGACTCAGGCCAACGCTCTCCTTCGCAAAAATCTGACTTTTCAGAAACGAAACGTGAGGACAAATGTACGGCTCATCTTATTCCCATTTTTGATCTGTGTGCTGCTTGTAGTTCTCCAACGGGTAATTGATAGTGAATTGGATAAGCCAAAAAACAAGTGTGGTTGCATTTGTACTAAGAGAGATGGCGATAAGTGTCTGGAGGAAACATGTGGGATTCAATACTCAGACGTAGATCAAGTTGCAACGTGTGCAATTCCTAACCCTCCAGAATGGCCTCCATTGATACAAGTGCCTTCTCCCAAATATCGAGCCGTGCAAACTGATATTATTCCCTTCTCAGATTTGCCAAATGATTCTTGCAGGAGGACAGGGTTGTGCCCTGTAACTTTTCTCTACACTGGCAATAATCAGTCCTTTGGAGAAACTTTGTTTGGAAATATGTATAAAAGTGCTTTTAGTGTGAATACCTCTGATGTTGTGGGTAGTCTGGCAAGAAATGTCCTGGGTTCAGCATCAATGCCACAAACGCAAAATTTTCTTGACCCAGCTTTCCTTTCAGATCTTCCCATTTATTATCTACAAACTCAGTGCACACAGAACTCTTCGTTCTCTGTTCCAATCCAGATTTCAACCAATACCATCCAGCAAGAGATTACATGTGCTCAAGGTTTACATTTATGGCGAAATAATCCTTCTGAGGTCAACAATGAGCTATTTAAAGGCTATCGAAAAGGGAACCCAGAGAGACAGATCAATGAGATAGTTGCAGCCTATGATTTTCTAAATTCAAGTAAGAATAGCTTCAATGTCATCACATGGTACAACTCAACCTATAAGAATGACACCGGTTTCCAGCAAATTGCATTGGCACGAGTTCCCCGTTTAGTAAATTTGGTATCAAATGCCTTCCTTCAGTTCCTGCAGGGTTCGGGTACTGAGATGTTATTTGAGTTTGTAAAGGAAATGCCAAAACCAGAGACCCCATTGAGAATTGACGTGGCTTCTCTTCTGGGTTCCCTCTTCTTTACTTGGGTCTTCCTGCAACTTTTCCCTGTATTTTTGACATCACTGGTATATGAGAAGGAGAAGAACCTCAGAATAATGATGAAGATGCACGGTCTTGGCGATGGGCCATATTGGATGATAACCTATGGCTATTTCTTTTCCCTCTCCGTGCTCTATGTGCTATGCTTCGTGATATTTGGCTCCCTCATAGGATTGAAATTCTTTACATTGAATGACTACAGCATCCAAATCGTTTTTTATTTCGTCTTCATAAACTTGCAAATTTCACTGGCATTTCTTGTGGCAGCCATGTTTTCAAATGTTAAGACAGCTACAGTAATTGCATATATCGGTGTCTTTGCAACTGGGCTTTTAGGTGGCTATCTTTTCAACTTTTTTGTTGAAGATCAATCATTCCCAAGAGGGTGGATAGTTGTTTTAGAGTTGTATCCTGGGTTTGCGTTATATCGTGGACTCTATGAGTTTGCATCATATGCCTTCGAAGCAAATGCTACAGGGAACGATGGAATGAGATGGGAAAATCTGAATGACAGTGTAAATGGCTTGAGGGAGGTCTTAATTATCATGTTCATTGAGTGGTTTGTGGTGCTTCTTGTTGCTTATTACATTGATCAAGTATCAGGAAGTCGCAAAAGTCCTCTCTTTTTCTTGAAAAGATTTCAGAAAAAGCCTATGTCTTCATTCCGGAAGCCTAGTATTCAAAGGCAGGGATCAAAAGTTTTTGTTCAGATGGAGAAACCTGATGTCAGTCAAGAGAGGGAAAAGGTTGAGCAGCTGCTACTTGAACCAACTATGGATCATGCAATTGTTTGTGACAACCTAAAAAAGGTGTACCCAGGGAGGGACGGAAACCCAGAGAAATATGCAGTGAAAGGTCTATCTCTTGCTTTGCCTCATGGGGAATGCTTTGGTATGCTTGGCCCCAATGGTGCTGGGAAGACCTCATTTATCAGTATGATGATTGGTCTCACGAAGCCAACCTCTGGTGCAGCATTTGTTCAAGGTATGGACATAAGAACTCAAATGGATGAAATATATACCAGCATGGGCGTATGTCCACAGCATGACTTGCTGTGGGAAACCCTAACTGGAAGAGAACACCTGCTCTTCTATGGCAGACTTAAAAATCTTAAAGGCTCAGCCTTAACACAAGCTGTGGAAGAATCTCTGAAAAGTGTAAACCTTTTTCATGGAGGAGTTGCTGATAGAAAAGCTGGAAAGTACAGTGGAGGAATGAAGAGAAGGCTTAGTGTTGCAATTTCATTGATTGGAGATCCCAAAGTTGTTTATATGGATGAACCAAGTACTGGATTAGACCCTGCATCAAGAAACAATTTATGGAATGTTGTCAAGCGCGCAAAGCAGAATCGGGCAATCATACTGACCACACATTCCATGGAAGAAGCAGAAGTCTTATGTGACCGAATAGGTATATTCGTAGATGGAAGCTGGCAGTGCATAGGAAATCCGAAAGAGCTAAAATCAAGATATGGAGGAAGCTATGTGTTCACAATGACAACATCTGTAGAGCATGAGAATGAAGTGGAGAACTTGGTGCTCAAGCTGTCTCCAAATGCTACCAAGGCATACCATATCTCTGGAACTCAGAAATTTGAGCTGCCAAAACAAGAAGTCAGAATAGCTGATGTCTTCCGAGCTATCGGCACCGCAAAGAGAAACTTCACTGTGTTTGCTTGGGGTTTAACGGACACCACAATGGAAGATGTCTTCATTAAGGTTTCACGTGAGGCTCAGGCATTCAACTCTTTGTCGTAA 2838 0.4197 MADAPRGSSTFWTQANALLRKNLTFQKRNVRTNVRLILFPFLICVLLVVLQRVIDSELDKPKNKCGCICTKRDGDKCLEETCGIQYSDVDQVATCAIPNPPEWPPLIQVPSPKYRAVQTDIIPFSDLPNDSCRRTGLCPVTFLYTGNNQSFGETLFGNMYKSAFSVNTSDVVGSLARNVLGSASMPQTQNFLDPAFLSDLPIYYLQTQCTQNSSFSVPIQISTNTIQQEITCAQGLHLWRNNPSEVNNELFKGYRKGNPERQINEIVAAYDFLNSSKNSFNVITWYNSTYKNDTGFQQIALARVPRLVNLVSNAFLQFLQGSGTEMLFEFVKEMPKPETPLRIDVASLLGSLFFTWVFLQLFPVFLTSLVYEKEKNLRIMMKMHGLGDGPYWMITYGYFFSLSVLYVLCFVIFGSLIGLKFFTLNDYSIQIVFYFVFINLQISLAFLVAAMFSNVKTATVIAYIGVFATGLLGGYLFNFFVEDQSFPRGWIVVLELYPGFALYRGLYEFASYAFEANATGNDGMRWENLNDSVNGLREVLIIMFIEWFVVLLVAYYIDQVSGSRKSPLFFLKRFQKKPMSSFRKPSIQRQGSKVFVQMEKPDVSQEREKVEQLLLEPTMDHAIVCDNLKKVYPGRDGNPEKYAVKGLSLALPHGECFGMLGPNGAGKTSFISMMIGLTKPTSGAAFVQGMDIRTQMDEIYTSMGVCPQHDLLWETLTGREHLLFYGRLKNLKGSALTQAVEESLKSVNLFHGGVADRKAGKYSGGMKRRLSVAISLIGDPKVVYMDEPSTGLDPASRNNLWNVVKRAKQNRAIILTTHSMEEAEVLCDRIGIFVDGSWQCIGNPKELKSRYGGSYVFTMTTSVEHENEVENLVLKLSPNATKAYHISGTQKFELPKQEVRIADVFRAIGTAKRNFTVFAWGLTDTTMEDVFIKVSREAQAFNSLS 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00053 945 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 623 860 IPR003439 GO:0005524
Accr8g00053 945 FunFam ABC transporter A family member 7 612 888 - -
Accr8g00053 945 CDD ABC_subfamily_A 627 848 - -
Accr8g00053 945 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 588 939 IPR026082 GO:0016020|GO:0055085|GO:0140359
Accr8g00053 945 Pfam ABC-2 family transporter protein 264 556 IPR013525 GO:0016020|GO:0140359
Accr8g00053 945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 622 851 IPR027417 -
Accr8g00053 945 SMART AAA_5 653 836 IPR003593 GO:0016887
Accr8g00053 945 Pfam ABC transporter 645 789 IPR003439 GO:0005524
Accr8g00053 945 Gene3D - 614 883 IPR027417 -
Accr8g00053 945 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00053 Accr-Chr8 786191 793778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00053 599 871 Calmodulin-binding Proteins AT2G36910 22.997 1.77e-13 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00053 - - gmx:100805474 1528.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr8g00053 8 786191 793778 Accr8g00053 8 786191 793778 ECH