Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00051 ATGGGAAATTGCTTTCGACACCGTCCCAAGCCTGAGGATACCAAAATCCCCTCTCACCCTTTTTCCGGTTCTACCCAAGTTTCTGTCAAAAGCACCCATCCCTATGCTAATTCGAGTCCAGTCAAAGGAGCCAAACCTCAGACACTCCCTACTCCAAGATTGGAAGGTGTCTTACTATCCTCTCTGCATCTGAAAGCCTTCACATTCAATGAACTTAACGATATTACTAGAAACTTTTGTCCTGATAATCTACTGGGAGAAGGTGGATTTGGTAAAGTTTACAAGGCGTGGATTGATGAACAGTCTTTTGGACCTGCAAGTCCTGAATCTGGAATGGCTGTAGCTGTTAAGAAGCTTAAGTGTAATGGTTTTCAAGGACACAAGGAGTGGCTGTCTGAACTCAATTATCTTGGTCAACTTCATCACCCAAATCTTGTTAAACTTCTTGGGTTCTGCATCGATGGGGATAGCCGGCTTCTGGTCTACGAGTACATGCCCAAAGGCAGCTTGGAGACTCATCTATTTCGCAGGGGTGCACAACCAATTCCTTGGGCAACAAGGATCAAAGTTGCTATTGGTGCTGCTCGAGGCCTCACCTTCCTCCATGACTCCGACCAACAAGTTATCTATCGTGACTTCAAGGCTTCTAACATCTTATTAGATTCGGAGTTTAATGCAAAACTCTCAGACTTCGGTTTTGCCAAAGCAGGGCCCACCGGGGATCGTACTCATGTTTCCACTCAAGTCCTTGGTACTCATGGCTATGCTGCTCCTGAATATATTCTCACAGGTTGGTTGACTGCAAGGTGTGATGTTTATAGCTTTGGGGTTGTGCTATTGGAACTACTCTCAGGACGCCGTGCCATTGACCAAACAAAATCCGGAGTTGAACAGAATCTGGTAGATTGGGCAAGACCATATTTGGGTGATAGGAGGAAGTTATTCAGGATAATGGACACAAAGTTAGAAGGGCAGTATCCACAGAAGGCAGCTTATACAGCAGCAATTCTTGCTCTGCAGTGCATCAGTGAGGCCAAAATCAGACCCCAAATGTCTGAAGTTCTAGCTGCTCTTGAACAGCTTCAACATGCCAAAACCTCAGCTAGTTCATCATCAAGATCCAGAGCAGAGAGTAGTAGCCCCTCCTTAAGCCCCGAGCGAGGTCATACAGACACATCATCATCATTGAGACAAAATCATCATTCAACAGAGAAAGATTTCATCTCCAGTCAGTTAATTGAGAGCACTGTAAGATCCCCTATTAAATCTGATCCCAAAGTACAGTGTGACCAGATTGGAAATCCTCTTCATGTGGATATCATCAATACATAG 1332 0.4482 MGNCFRHRPKPEDTKIPSHPFSGSTQVSVKSTHPYANSSPVKGAKPQTLPTPRLEGVLLSSLHLKAFTFNELNDITRNFCPDNLLGEGGFGKVYKAWIDEQSFGPASPESGMAVAVKKLKCNGFQGHKEWLSELNYLGQLHHPNLVKLLGFCIDGDSRLLVYEYMPKGSLETHLFRRGAQPIPWATRIKVAIGAARGLTFLHDSDQQVIYRDFKASNILLDSEFNAKLSDFGFAKAGPTGDRTHVSTQVLGTHGYAAPEYILTGWLTARCDVYSFGVVLLELLSGRRAIDQTKSGVEQNLVDWARPYLGDRRKLFRIMDTKLEGQYPQKAAYTAAILALQCISEAKIRPQMSEVLAALEQLQHAKTSASSSSRSRAESSSPSLSPERGHTDTSSSLRQNHHSTEKDFISSQLIESTVRSPIKSDPKVQCDQIGNPLHVDIINT 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00051 443 MobiDBLite consensus disorder prediction 1 15 - -
Accr8g00051 443 Gene3D Transferase(Phosphotransferase) domain 1 165 382 - -
Accr8g00051 443 CDD STKc_IRAK 85 361 - -
Accr8g00051 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Accr8g00051 443 PANTHER OS01G0588500 PROTEIN-RELATED 47 362 - -
Accr8g00051 443 Pfam Protein tyrosine and serine/threonine kinase 83 305 IPR001245 GO:0004672|GO:0006468
Accr8g00051 443 ProSitePatterns Protein kinases ATP-binding region signature. 85 118 IPR017441 GO:0005524
Accr8g00051 443 MobiDBLite consensus disorder prediction 366 409 - -
Accr8g00051 443 MobiDBLite consensus disorder prediction 18 45 - -
Accr8g00051 443 MobiDBLite consensus disorder prediction 1 49 - -
Accr8g00051 443 ProSiteProfiles Protein kinase domain profile. 79 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr8g00051 443 SUPERFAMILY Protein kinase-like (PK-like) 54 358 IPR011009 -
Accr8g00051 443 FunFam Serine/threonine-protein kinase BIK1 47 164 - -
Accr8g00051 443 Gene3D Phosphorylase Kinase; domain 1 60 164 - -
Accr8g00051 443 FunFam Serine/threonine-protein kinase PBS1 165 377 - -
Accr8g00051 443 MobiDBLite consensus disorder prediction 366 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00051 Accr-Chr8 767920 770689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00051 58 358 Glycoside Hydrolase AT3G07070 52.787 4.40e-106 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr8g00051 PK_Tyr_Ser-Thr 8.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00051 - - qsa:O6P43_022821 569.311