Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00048 ATGTCTAGCAGAAGAACTTCATCAAATCTCTCAGAGAATGAGATTAATGAGATTGTTTCCAGGTTACAGGCAGTACTGCCACGGCTGAACCAAAGAACCAACTCAAGGGCATCAGTATCGAAGATAGTGAAAGAAGCATGCAGTCACGTGAAGAAGCTTCAGAAAGAGGTGGATGAGCTTAGTGAGAAAGTAGCAGGCCTCATGGATTCTGTGGATATCACTCATATTGACGAACAAACCCTTCGAAGCATTCTCCAACATTAA 264 0.428 MSSRRTSSNLSENEINEIVSRLQAVLPRLNQRTNSRASVSKIVKEACSHVKKLQKEVDELSEKVAGLMDSVDITHIDEQTLRSILQH 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00048 87 Coils Coil 43 70 - -
Accr8g00048 87 Gene3D - 2 83 IPR036638 GO:0046983
Accr8g00048 87 PANTHER DNA BINDING PROTEIN 1 86 IPR044172 -
Accr8g00048 87 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 70 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00048 Accr-Chr8 716390 717062 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00048 10 85 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G39860 38.961 3.68e-15 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00048 - - qsa:O6P43_022826 97.0561