Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00026 ATGGGGAGACCTCCTTGCTGTGACAAAATAGGGGTGAAGAAAGGACCTTGGACTCCTGAAGAAGACATCGTCTTGGTCTCCTACATGCAAGAACACGGCCCTGGCAATTGGAGATCAGTTCCCACCAATACCGGTTTGATGAGATGCAGCAAAAGCTGCCGACTCCGATGGACCAACTATCTCCGGCCCGGTATCAAACGCGGCAACTTCACCCAGCATGAGGAGAAGATGATCATCCACCTTCAAGCCCTTCTCGGAAACAGGTGGGCGGCCATAGCTTCTTATCTTCCACAGAGAACAGACAATGACATCAAGAATTACTGGAACACTCATCTCAAGAAGAAGCTCATGATGATGAACAAGGGAGCAGCAGAAAATGGCGGCAGCCGTAACGATCAGGAAGACGGTGGAGATTTATCCACGTCATCATCTTCACAACCAAACAAGGGTCAGTGGGAAAGAAGGCTTCAAACTGATATCCACATGGCCAAACAAGCCCTATGTGAAGCTCTCTCCATTGACAAGCCCTCTCCTTATACTAATAACAATTTCCCTATGATCTCTGACACTACTCATAATAATAAGCCCTCATTTTCCTTCAACCCCATCAACAGCACCACAAAATTACCTGACCAAGCACAGGGGAAAGCAGGATCATCGTACGCGTCGAGTGCCGATAATATAGCTCGGCTTCTGCAAAATTGGATGGCGAAGAAGACGACGCCAATAAACTCGGTATCCGGTTCGACTTCGAGCGAAGGAGCGCAGTGTGGGAGTGGGACTAGCACCACAACACCAGATCAGGGCTTTGAGCATTGTTCTCTCTTGAGCTCTAATAATGACAACAACAATAACAATTCTGATGTGTCTACAGAGACTAATAGCTTGTTACAAGAAGAGAGCAAGCTAGGTTTGGAAACTCGTAATCATAATCACGTGCCTTTCACGTTTCTGGAGAATTGGCTTTTTGATGATGCCACAGCTCCACAAGGCCATGAAGATTTGTTGACCATGTCTCTTCAGGATACTACACCTGACCTATTTCAGACTCATCATCATCAGTTGGCAAAGCAGAAATTCTAG 1083 0.4672 MGRPPCCDKIGVKKGPWTPEEDIVLVSYMQEHGPGNWRSVPTNTGLMRCSKSCRLRWTNYLRPGIKRGNFTQHEEKMIIHLQALLGNRWAAIASYLPQRTDNDIKNYWNTHLKKKLMMMNKGAAENGGSRNDQEDGGDLSTSSSSQPNKGQWERRLQTDIHMAKQALCEALSIDKPSPYTNNNFPMISDTTHNNKPSFSFNPINSTTKLPDQAQGKAGSSYASSADNIARLLQNWMAKKTTPINSVSGSTSSEGAQCGSGTSTTTPDQGFEHCSLLSSNNDNNNNNSDVSTETNSLLQEESKLGLETRNHNHVPFTFLENWLFDDATAPQGHEDLLTMSLQDTTPDLFQTHHHQLAKQKF 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00026 360 CDD SANT 69 112 IPR001005 -
Accr8g00026 360 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 284 - -
Accr8g00026 360 CDD SANT 16 61 IPR001005 -
Accr8g00026 360 MobiDBLite consensus disorder prediction 123 152 - -
Accr8g00026 360 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Accr8g00026 360 SMART sant 66 114 IPR001005 -
Accr8g00026 360 SMART sant 13 63 IPR001005 -
Accr8g00026 360 MobiDBLite consensus disorder prediction 133 152 - -
Accr8g00026 360 MobiDBLite consensus disorder prediction 178 202 - -
Accr8g00026 360 MobiDBLite consensus disorder prediction 242 291 - -
Accr8g00026 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Accr8g00026 360 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Accr8g00026 360 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Accr8g00026 360 Gene3D - 13 66 - -
Accr8g00026 360 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Accr8g00026 360 Gene3D - 68 137 - -
Accr8g00026 360 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Accr8g00026 360 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Accr8g00026 360 FunFam MYB-related transcription factor 13 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00026 Accr-Chr8 448034 449645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00026 1 340 MYB Transcription Factor Family AT5G62470 52.101 1.24e-109 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr8g00026 Myb_DNA-binding 2.4e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00026 K09422 - cit:102626104 390.963