Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00018 ATGGCCACCGTCACCACCCAGGCTTCCGCCGCCGTCTTCCGCCCATCATGCTCCTCCAGATCCAGATTCCTCACCGGCTCTTCCGGTAAATTAAACAGGCAAGTCGGTTTCAGAACCGTGATGCCTCCTTCCTCTGCTTCCTCCTCCTCTTTCAAGGTTGAAGCCAAGAAAGGAGAATGGCTTCCTGGTCTGCCTTCACCAGCCTACCTCAATGGACGTCTTCCGGGCGACAATGGATTTGACCCTCTGGGGCTAGCAGAGGACCCAGAGAACTTGAGGTGGTTCGTGCAAGCTGAGCTGGTAAATGGGAGGTGGGCCATGCTGGGTGTTGCAGGAATGCTTCTTCCAGAAGTGTTCACAAAGATTGGAATCCTCAATGTTCCAAAGTGGTACGACGCAGGCAAAGAAGAGTACTTTGCATCATCTTCAACCCTGTTCGTGATCGAGTTCATTCTGTTCCATTACGTGGAGATCAGAAGATGGCAAGACATTAAGAACCCTGGAAGTGTCAACCAAGACCCCATCTTCAAGCAATACAGCTTACCACCTAATGAAGTTGGATACCCAGGTGGCATCTTCAACCCCCTCAACTTTGCTCCCACACTAGAGGCCAAAGAGAAGGAAATTGCCAACGGGAGATTGGCGATGTTGGCATTTTTGGGATTTTTGGTTCAACACAACGTGACGGGGCAAGGACCATTTGACAACCTGTTGCAGCATCTTTCTGATCCATGGCACAACACAATTGTTCAAACTTTTAGGGGCAACTGA 771 0.5032 MATVTTQASAAVFRPSCSSRSRFLTGSSGKLNRQVGFRTVMPPSSASSSSFKVEAKKGEWLPGLPSPAYLNGRLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKIGILNVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLPPNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFLVQHNVTGQGPFDNLLQHLSDPWHNTIVQTFRGN 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00018 256 FunFam Chlorophyll a-b binding protein, chloroplastic 67 246 - -
Accr8g00018 256 Pfam Chlorophyll A-B binding protein 67 226 IPR022796 -
Accr8g00018 256 SUPERFAMILY Chlorophyll a-b binding protein 57 253 - -
Accr8g00018 256 Gene3D Chlorophyll a/b binding protein domain 67 246 - -
Accr8g00018 256 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 18 252 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00018 Accr-Chr8 321512 322506 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00018 45 253 Chloroplast and Mitochondria Gene Families AT3G61470 53.488 1.47e-76 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00018 K08910 - rcu:8263414 474.167