Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00014 ATGGAGAACATTCCTGTGCTGTCCAACAAGGAAGAAGGTCAGATTAATTCGTCCATTGGCTTTCGGTTTCACCCAACAGATGAAGAGCTGCTCACTCTTCTTCTGAAAAAGAAGACCCAGAATGCAAAATTCTCACATATAGCCATTGCAGAAGTGGATATACTAAAGTATGAGCCTTGGCATTTGCGGGAGCAAGCAAAAGCAGGAGAGGATGAGTGGTATTTTTTCGGCCTGTCAGAGAGAAAATACAAAAAGGGTCCGAAAATCGACAGAGCCACTGAAGCTGGGTACTGGAAATCCACAGGGAAAGATGAGGAGATTGTTAACGGAGGAAGAAGACTGAGAGGGAAGAAGAAAATTCTGGTTTTCTACGATGAACGAGAAGCACCTGTAAGAAAAACGGACTGGGTCATGCATGAATACAGACTAGATGGAAAATCCTCTGTCCCCAACCCCCCTACAACTGCAAAGAACCAGTGGCTGATTTGTAGGGTGTTTAAGAAGACTGCGGACAAAAAGAGAACCCGCAATTCTGCTATAAAGAGGTTAGACGGTTCTCCTCCAGTGTCACCTTCACCAACTGTCGTCCCAGATGATTTCCCGGACGCAGTGGGCGATGAGATAATTACTCGTTTGGCAAATTTGGCCTGCTTCTCCCCTGCGTCATGCGACGATGTTGTTGTGACAGAGGCAGAGCAAATGCTGAGTGTTTCGCATGAAACGAATCTGACCAACAGACTTGAATCCAATGGAGATGGATTGGATCCTTCTTCACTGCCACTTTCACCGCCTATCGTCCCAGGTGGCATAGGCCCAACGGAACCTACGAGTACCAATTGGGGACATGTACCCTGCTTCTCCCCTCCGTTTTGCGACTATGGTGTTATGGCAGAGCGAGAGCAAATGCTGAATGTTTCGCATGAACACTATCTGGTCAACGGTGAGTGTGGTTATAGCCTCTGGTATCTCTAG 972 0.4712 MENIPVLSNKEEGQINSSIGFRFHPTDEELLTLLLKKKTQNAKFSHIAIAEVDILKYEPWHLREQAKAGEDEWYFFGLSERKYKKGPKIDRATEAGYWKSTGKDEEIVNGGRRLRGKKKILVFYDEREAPVRKTDWVMHEYRLDGKSSVPNPPTTAKNQWLICRVFKKTADKKRTRNSAIKRLDGSPPVSPSPTVVPDDFPDAVGDEIITRLANLACFSPASCDDVVVTEAEQMLSVSHETNLTNRLESNGDGLDPSSLPLSPPIVPGGIGPTEPTSTNWGHVPCFSPPFCDYGVMAEREQMLNVSHEHYLVNGECGYSLWYL 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00014 323 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 20 219 - -
Accr8g00014 323 ProSiteProfiles NAC domain profile. 17 168 IPR003441 GO:0003677|GO:0006355
Accr8g00014 323 Gene3D NAC domain 26 173 IPR036093 GO:0003677|GO:0006355
Accr8g00014 323 MobiDBLite consensus disorder prediction 174 195 - -
Accr8g00014 323 Pfam No apical meristem (NAM) protein 19 143 IPR003441 GO:0003677|GO:0006355
Accr8g00014 323 SUPERFAMILY NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00014 Accr-Chr8 267719 268860 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00014 20 226 NAC Transcription Factor Family AT5G07680 49.776 1.28e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr8g00014 NAM 6.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00014 - - gmx:100170719 201.06