Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00013 ATGGAGATGTCCAACAAGGAGGAAGATCAGATTAATTCGTCTCCTGGCTTTCGCTTTCAACCAACAGATAACGAGCTACTCACTTATTATCTGTCCAAGAAGACCAAGAATGCCAAATTCTCTGCTAGAGCCATTGCGGAAGTGGATATACTAAAGATTCAGCCTTGGGATTTGCCGTCGAATGCGAAAATGGGAGATTATGAGTGGTATTTTTTCTGCAAGAGAATCAGCAAATACCAAGATGGTTCGAAAGCCATCAGAGCCACTGAAGCTGGGTACTGGAAATCCTCAGGGCGCGATCAGGAGATTTACCGAGGAATAAGCCTGATAGGGACGATGAAAACTCTGGTTTTCTACAAGGGAAGACCACGAAGAGAAAGAACCGGCTGGGTCATGCATGAATACAGATTAGATGGAGACTTATCTGTCCACAACTCCTCCAGACCTGGAGATGACGAGTGGGTGATTTGCAGAGTGTTTGAGAAGCCTTCAAGGGGCAAGAAAACCTACATTTCTGATATAGAGAAGCCAACAACGCCTCTTCATGATTCGTCGTATTCTGCATTGACCGACGCGGATCAGTACTTTGATTACAATCGTTTTAAAGCAGAGCATAGAGCCAGGCGCCAACTTGGCCGGCCTGTTAGGTCCTAG 654 0.4587 MEMSNKEEDQINSSPGFRFQPTDNELLTYYLSKKTKNAKFSARAIAEVDILKIQPWDLPSNAKMGDYEWYFFCKRISKYQDGSKAIRATEAGYWKSSGRDQEIYRGISLIGTMKTLVFYKGRPRRERTGWVMHEYRLDGDLSVHNSSRPGDDEWVICRVFEKPSRGKKTYISDIEKPTTPLHDSSYSALTDADQYFDYNRFKAEHRARRQLGRPVRS 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00013 217 ProSiteProfiles NAC domain profile. 13 162 IPR003441 GO:0003677|GO:0006355
Accr8g00013 217 SUPERFAMILY NAC domain 7 162 IPR036093 GO:0003677|GO:0006355
Accr8g00013 217 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 175 - -
Accr8g00013 217 Pfam No apical meristem (NAM) protein 15 137 IPR003441 GO:0003677|GO:0006355
Accr8g00013 217 Gene3D NAC domain 22 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00013 Accr-Chr8 204330 205149 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00013 15 197 NAC Transcription Factor Family AT5G07680 55.978 4.38e-70 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr8g00013 NAM 1.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00013 - - jre:109020336 231.491