Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr8g00009 ATGGAAAGCGTTTGTGTTACGTATAACAAGGATGTAGATCGCATGAATTTGCCTCCTGGTTTTCGGTTTCACCCAACAGATGAAGAGCTAATCACTCACTATCTGTTCAACAAGGTCACTCTCACAAACTTCTCTGCTATAGCCATTGGAGAAGCGGATTTGAACAGGTCTGAGCCTTGGGATTTGCCCCGGAAAGCAAAAATGGGAGAGAAAGAGTGGTATTTTTTCTGCGTGAGAGACAGAAAATACCCAACTGGTTTGAGAACCAACAGAGCAACAGAAGCAGGGTACTGGAAGGCCACAGGTAAGGACAGAGAGATTTACAGAGGAAAATCACTGGTAGGGATGAAGAAAACTCTGGTTTTTTACAGAGGAAGAGCACCAAAAGGAGAAAAAACCGATTGGGTCATGCATGAATTCAGATTGGATGGTAAATTCTCTGTTCACAACCTACCCAAAACTGCAAAGAAAGAGTGGGTTGTTTGCAAGTTGTTTTGGAAAAACTATAGTGGTAATAAAACCCATATGAGATTTGAAGTTGAATCCACTGAAAATGGATTGGGTTCTTCAGTCTTATTACCTCCTCTGGCGGATTCTTCTCCTTTTATTGGTAAAACAGAGCCCAAGGTAACAGAGTCGGCGTACGTGTCCTGCTTCTCCATTGCAATTGGTGATCAAAGAAACCAAGAAGGAATATTTGATTCCTTAGGAAATTCCATTTTGAGGATTCCTTCAAATTATTCACAAATCCTACCCAGAACCCCTCTGTATTCTGCTCAACCTTATCAAGCTCATGGAAATTTCTGTAGGCAGAACCAGAAGAACTTGCTTGAGGCTTTTCTTGAAAACCATGGATCAAACATGAGGAATGGTTTCAATCCCAAGGGAGAACAATTTGTAAGTGTTTCACAAGAAACAAGTCTCACCACTGATATGAATCCTGAAATTTCTTCTGTGATGGTATCAAGTTTTGGTGTTGGTAGGAGGGTTTTTGAGAATAATGATCAGCAAAATCTCTCTGCTTTTCCAATGGACCGTGATGGCTTGTGGAATTACTAA 1059 0.4098 MESVCVTYNKDVDRMNLPPGFRFHPTDEELITHYLFNKVTLTNFSAIAIGEADLNRSEPWDLPRKAKMGEKEWYFFCVRDRKYPTGLRTNRATEAGYWKATGKDREIYRGKSLVGMKKTLVFYRGRAPKGEKTDWVMHEFRLDGKFSVHNLPKTAKKEWVVCKLFWKNYSGNKTHMRFEVESTENGLGSSVLLPPLADSSPFIGKTEPKVTESAYVSCFSIAIGDQRNQEGIFDSLGNSILRIPSNYSQILPRTPLYSAQPYQAHGNFCRQNQKNLLEAFLENHGSNMRNGFNPKGEQFVSVSQETSLTTDMNPEISSVMVSSFGVGRRVFENNDQQNLSAFPMDRDGLWNY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr8g00009 352 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Accr8g00009 352 Gene3D NAC domain 26 171 IPR036093 GO:0003677|GO:0006355
Accr8g00009 352 ProSiteProfiles NAC domain profile. 17 167 IPR003441 GO:0003677|GO:0006355
Accr8g00009 352 SUPERFAMILY NAC domain 8 167 IPR036093 GO:0003677|GO:0006355
Accr8g00009 352 FunFam NAC domain-containing protein 100-like 26 171 - -
Accr8g00009 352 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr8g00009 Accr-Chr8 117123 118369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr8g00009 15 352 NAC Transcription Factor Family AT5G07680 54.678 8.34e-117 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Accr8g00009 NAM 3.5e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr8g00009 - - qsa:O6P43_022865 429.869