Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g02040 ATGGTGTTGCTGAAGAATTTGAACTACAGTTTTAATGGCTATCAAGTGCCTGTCATTCCTAAAGCTTCGAGAACAACTAGGGGGAGGGGTACAGTCAGGAAGAAGAGTGAGGACAATCAGATACAAGCTTTTGAAATATTGGCCAGTGTAGCTGGCAACTTTCTGCAGGAGAACAAAAACTCGAATGCTGAGAATGCTGTGGCTGGAAAGGATTCCATAGGTTTTGTTGGAATTAACATAAAGGATAAACAAGAGGAAGAATCAGGGTCATTTAAGAGTGATGATGGATGTTGCAGTGAGAATGCCTCTAGCTCAGTCTCTAGTTTGGAAGGGAAGAATAATGGCCAAAGGGTTGAAGGCTGTTCATCTTTTCTTGGCAATCGTCTTGAAGGCCGAGGACAGAATGTTTTTGAGAAGGAAGCGGATGGACTGATAAAAGAGAATTGTGTGAATGAGAAAACTGTTTATGTTACAGGTAGCTCTGCTGGAGTGTCAAAACCTGACCACAGGGCTTCTAAACGGGAAAGTTCGGAAAATTCTTTTGAGAAGCCTTCATTGGAGGGTCTTATACATGGTTCCAGTGGTAGGAAATTATTTAATAGAGATGATGACGAAAACTTTGCTAGGTGTACTCAACCAAGATCTAAGAATAGGAATTCTGGCCCCCTGCCAGATATGCCTTTTCAAAGTGTGAATAGTGTTTCTGCATCCAAAAGTCGTGATGTAGGCCAAAAGTCAAAGAATGGGAGTTTGTATGGAAGTGATGACAGTATTGGTAGAGACAATTATATGCTTGAAAGCTCGCAGAGGATGTATCCTTTTAAGAAGAGGAAGTTCTTCAAACAGACTTCATTTTCTGCATCTGATAGGGGATCTCATTGTCGTGGCAGATTTGATTTTTCTGACACCAGAATTGATGGTGTGAACTGCAGTGCAGCAATTGGAGCATCATCCTCTATAGCTGGTCAACAAATGCATACCGGGTCAAGGGATTGTAATGTGAAGCTTAGCATAAAATCTTTTAAAGTCCCAGAGCTTTTTATTGATATCCCTGAAACTGCAACTATTGGTTCATTAAAGAGGACAGTTATGGAGGCAGTGACAGCTATTTTAGGAGATGAACTGCATGTAGGTATTCTTCTTCAGGGAAAGAAGGTTCAAGATGACAACAAAACTCTAATTCAGACCGGGATTTCTCAAGACGATAAACATCATAGATTGGGGTTCATGTTGGAGCCAAGACATACTAAAATTACACCACCATCATATAGTGAAGACCTTCCTTTTCGAACCACTAGTTTGCATCGGGATATATCCAGGAAACCTACATCTTTGATGCTTCAACAAAGAACTTATAATGTCTCCCAAGAGCATTCCCTGATTAAATTTGAAAGCTGTGGTGAAGGTGACCTAAACGTGGTCCCCACCCTAGCAGATACTTCTCGTAACAATACCATGTCAAAGTGCCGTGCTCTAGTTGCAGTTCCGGCTATTGACATGGAGGCATTAGCTGTCATTCCCTTCTGTCATAAACCTCGGAATCCTGACTTTGTGCAGCGCCGAATCAGGAGGCCTTTCTCTGTTTCTGAAGTCGAAGCACTGGTTCAGGCAGTTGAAAAACTAGGAACTGGAAGATGGCGTGATGTCAAACAGTGTGCCTTTGACAATGCAAAGCACAGGACTTATGTGGATTTGAAGGATAAGTGGAAGACATTAGTGCACACGGCAAGAATCTCCCCTCAGCAAAGGAGAGGAGAACATGTTCCTCAGGAGCTCTTGGACAGAGTCTTAGCTGCTCATGCCTATTGGTCTCAACAGCAATGTAAGCACCCAGTTAAGCCTCTTTGA 1848 0.4242 MVLLKNLNYSFNGYQVPVIPKASRTTRGRGTVRKKSEDNQIQAFEILASVAGNFLQENKNSNAENAVAGKDSIGFVGINIKDKQEEESGSFKSDDGCCSENASSSVSSLEGKNNGQRVEGCSSFLGNRLEGRGQNVFEKEADGLIKENCVNEKTVYVTGSSAGVSKPDHRASKRESSENSFEKPSLEGLIHGSSGRKLFNRDDDENFARCTQPRSKNRNSGPLPDMPFQSVNSVSASKSRDVGQKSKNGSLYGSDDSIGRDNYMLESSQRMYPFKKRKFFKQTSFSASDRGSHCRGRFDFSDTRIDGVNCSAAIGASSSIAGQQMHTGSRDCNVKLSIKSFKVPELFIDIPETATIGSLKRTVMEAVTAILGDELHVGILLQGKKVQDDNKTLIQTGISQDDKHHRLGFMLEPRHTKITPPSYSEDLPFRTTSLHRDISRKPTSLMLQQRTYNVSQEHSLIKFESCGEGDLNVVPTLADTSRNNTMSKCRALVAVPAIDMEALAVIPFCHKPRNPDFVQRRIRRPFSVSEVEALVQAVEKLGTGRWRDVKQCAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEHVPQELLDRVLAAHAYWSQQQCKHPVKPL 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g02040 615 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 153 IPR031105 -
Accr7g02040 615 MobiDBLite consensus disorder prediction 212 254 - -
Accr7g02040 615 MobiDBLite consensus disorder prediction 160 254 - -
Accr7g02040 615 CDD SANT_TRF 524 574 - -
Accr7g02040 615 MobiDBLite consensus disorder prediction 196 211 - -
Accr7g02040 615 SUPERFAMILY Homeodomain-like 524 605 IPR009057 -
Accr7g02040 615 MobiDBLite consensus disorder prediction 86 117 - -
Accr7g02040 615 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 519 577 IPR017930 -
Accr7g02040 615 Pfam Myb-like DNA-binding domain 523 572 IPR001005 -
Accr7g02040 615 SUPERFAMILY Ubiquitin-like 329 413 IPR029071 -
Accr7g02040 615 MobiDBLite consensus disorder prediction 94 117 - -
Accr7g02040 615 Gene3D - 513 614 - -
Accr7g02040 615 SMART sant 522 575 IPR001005 -
Accr7g02040 615 MobiDBLite consensus disorder prediction 167 181 - -
Accr7g02040 615 ProSiteProfiles Myb-like domain profile. 518 573 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g02040 Accr-Chr7 53125189 53135213 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr7g02040 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g02040 - - gmx:100807254 771.155