Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g02018 ATGGAAAAAGAAGGTCAATGTTGGATTTGGACAAAGAGAAAGCACTCATCTTTGAGCTCTTATAATAATAGTACTCTTTCTTCTCCGACGACTCACAAGTTTAGCTATGGTGATTCATGGGAAGAACAAGCTTTTGCAGAAGATGAGCGCCTGGGTGGCTGTATTTGGCCTCCAAGATCATATTCTTGCAGCTTTTGTAACAGAGAGTTCAGGTCAGCTCAAGCTCTTGGTGGCCACATGAATGTTCACAGAAGAGATAGAGCTAGGCTAAAGCAACCCCCAAGCCCACACAAACAAGACGAAACCACTACTCTTGATCGTCATCATCAAAATTCGTTCTCATCTTCTTGTCTGCCTTGTTCCAATGCTAACCCTAATTGCGATCATCATCATCATCTTGAGGCTAAATTCGCCCATCCTTCTTTGATTATTCAAGAGAATTCTTCCCCACCGGACGATTCTTGTATTTCGTGGTCAAACTTTGCTAAACAAAGATTATATTCTTGCAAGGTCGATCTTATTGGAACTGAAGATAAGATGTCCAAGATAATAGATACGGATGATTATCATAAGGATGAAGCTGGTATTATGAGCTACAAGAGGAGAAGAATAATAGATGATTCATCATCAATTATTCCAGTTGTTAATAGGAATGATAATATGATCAAGTCTCAGATGTTGGAGTTTATTAGTCCCAGTTCCATTATTGAAGAGCTAGATCTGGAGCTAAGGCTTGGTCATAGTCCTCCCAAGGTATAG 759 0.3992 MEKEGQCWIWTKRKHSSLSSYNNSTLSSPTTHKFSYGDSWEEQAFAEDERLGGCIWPPRSYSCSFCNREFRSAQALGGHMNVHRRDRARLKQPPSPHKQDETTTLDRHHQNSFSSSCLPCSNANPNCDHHHHLEAKFAHPSLIIQENSSPPDDSCISWSNFAKQRLYSCKVDLIGTEDKMSKIIDTDDYHKDEAGIMSYKRRRIIDDSSSIIPVVNRNDNMIKSQMLEFISPSSIIEELDLELRLGHSPPKV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g02018 252 PANTHER OS07G0101800 PROTEIN 36 249 - -
Accr7g02018 252 SUPERFAMILY beta-beta-alpha zinc fingers 58 87 IPR036236 -
Accr7g02018 252 SMART c2h2final6 61 83 IPR013087 -
Accr7g02018 252 MobiDBLite consensus disorder prediction 80 107 - -
Accr7g02018 252 Gene3D Classic Zinc Finger 58 116 - -
Accr7g02018 252 Pfam C2H2-type zinc finger 61 85 - -
Accr7g02018 252 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Accr7g02018 252 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 88 IPR013087 -
Accr7g02018 252 MobiDBLite consensus disorder prediction 80 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g02018 Accr-Chr7 52853982 52854740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g02018 41 252 C2H2 Transcription Factor Family AT5G06070 36.889 3.15e-30 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Accr7g02018 zf-C2H2_6 6.9e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g02018 - - pcin:129291690 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g02018 7 52853982 52854740 Accr7g02018 7 52853982 52854740 ECH