Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g02008 ATGGTGCAACTTAGGGTTCCTGCAACAACCTTAATCTTCACGATGGTGGTGCTACTATCTTGTGCCGGCGGTGGCATGGCACGGCAGTGCCTCAACTGCGGGTCAAATCCTGTTCCATACCCGTTAAGTACCGGACCCGACTGTGGCCATTCGATGTACAATATTAAGTGCATAAAGGGCAATTTGTGGTTTGATGCCCTTGGTGGATCGTCTTACATGATAAAGTCCATCAATCCGGTGACTCGCCGGGTCATTTTACGGCCTTCAGGCATCGAGCCGAGGGCGTGTGTATCCACGGACTTCCGCAGTGAAGGCATACACCTGAACAAAGCCCTTCCCTTTAAAATCACCAGCAATAACACCGTCTTTCTGTACAACTGTACGGACGTAATGCTGAAATCAAAACCGCCCTTGGATTGTTCACCTGACTGCCTGTGTCATAGCTACATTAAGGACCATGCAGAAGGTGGTGTCGCGTGCAAAAGCGTGGGGTTGTGCTGCTGCTTCAGGACTGGTAAGCCGTTCCCGGAGGACATGGTAAGGGTGCATGGGGGAGAGTGTGCCGAGTATCAGAGTTTTGTGAATCTCAATGTGGCCGCTGCAGCAGCTCCGCTGCCGTATAAGTGGCCGGAGCCGGGGATAGAGCTGGAGTGGGTGGTGCCAGAGGAGCCAGTTTGCACGGGCCCAATTGATTGCAAGGAGCTTTTGAATTCCCAATGCTTAAAGGATCCGATCAATGCTAAGCAAATGAAGTGCCTTTGCAATGTTGGCTTCAAGTGGGACCCCAGCAATGATGCAACCTGCAGCCCAAGGGATGGTAAAAAAGGTAAACAGTGCAAACCTTTTCATCGGAAGAAGAAAAAGGCCCTGCCACTCGCTGCTGTGGGAGCTTCCTTGGGAGGCATAGTATTCATTGCACTGATAGCGAGCATTGTTCTATACAAGAAGCTTGAGAAATCAAAGAAACAAGCCGAAAGGAATGATAAATCAAAGAAACAAGCCGACAGGAAGCTAACGAAGCAAAAAGAAAGAATGGTGAGCGCCAAAGCAAACTCTGGGCTATCAGCGAGGATGTTCACGATGAGAGGGATAAAGAAAGCAACCAACAACTTCTCACAAGACAACCTCATCGGCACGGGCGGCTTCGGAGAGGTCTTCAAAGGAACCTTCGACGACGGCACCGTCATCGCCGTCAAACGAGCTAAACTCGGCAATACCAAAGCCCTCGACCAAATCCTCAACGAGGTCCGAATTCTGTGCCAAGTCAATCACCGTAACCTCGTACGCCTCCTAGGTTGTTGCGTCGAACTAGACCACCAACCCCTTCTTATTTACGAATATATCCCCAATGGCACCCTCTTCGACCAACTCCATACCCACCGTTTTGATCCTCCTCTCAATTGGCTTCACAGGCTCAAAATCGCCCACCAAACAGCTCAAGCTCTCTATTATCTTCACTCTTCAGCATTGCCTCCTATATACCATAGGGACGTGAAATCAAGCAATATACTGTTAGATGATAAGCTAGATGCTAAAGTTTCAGACTTTGGGCTATCTAGGCTTGTTGAGATAGCTGAGGCGGATAAAAGTCATATCTTTACCAGTGCACAGGGGACATTAGGGTATCTTGATCCGGAGTATTATCGTAATTTTCAGCTGACTGATAAGAGTGATGTGTATAGTTTTGGGGTGGTGTTGTTGGAGATTCTGACGCGTGAGAAGGCTATTGATTTTAACAGGGAAGAGGAGAATGTGAACTTGGTGGTTTATGGGAAGAAGATGATAAAGGAAGAGAGGTTTGTGGACATGGTTGATCCTGTGTTGAAGGATGGAGCCAATAACTTGGAGCTGGAGACGATCAAGTCTTTGGGGTTTCTTGCAGTGGCTTGCTTGGATGAGCAGAGGCAAAATCGGCCTTCCATGAAGGAAGTTTCCGGTGAGATTGAGTACCTTATTAGTATTCTTTCTAATGATGTTCCCAAAACATAG 1989 0.4816 MVQLRVPATTLIFTMVVLLSCAGGGMARQCLNCGSNPVPYPLSTGPDCGHSMYNIKCIKGNLWFDALGGSSYMIKSINPVTRRVILRPSGIEPRACVSTDFRSEGIHLNKALPFKITSNNTVFLYNCTDVMLKSKPPLDCSPDCLCHSYIKDHAEGGVACKSVGLCCCFRTGKPFPEDMVRVHGGECAEYQSFVNLNVAAAAAPLPYKWPEPGIELEWVVPEEPVCTGPIDCKELLNSQCLKDPINAKQMKCLCNVGFKWDPSNDATCSPRDGKKGKQCKPFHRKKKKALPLAAVGASLGGIVFIALIASIVLYKKLEKSKKQAERNDKSKKQADRKLTKQKERMVSAKANSGLSARMFTMRGIKKATNNFSQDNLIGTGGFGEVFKGTFDDGTVIAVKRAKLGNTKALDQILNEVRILCQVNHRNLVRLLGCCVELDHQPLLIYEYIPNGTLFDQLHTHRFDPPLNWLHRLKIAHQTAQALYYLHSSALPPIYHRDVKSSNILLDDKLDAKVSDFGLSRLVEIAEADKSHIFTSAQGTLGYLDPEYYRNFQLTDKSDVYSFGVVLLEILTREKAIDFNREEENVNLVVYGKKMIKEERFVDMVDPVLKDGANNLELETIKSLGFLAVACLDEQRQNRPSMKEVSGEIEYLISILSNDVPKT 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g02008 662 Pfam Protein tyrosine and serine/threonine kinase 374 645 IPR001245 GO:0004672|GO:0006468
Accr7g02008 662 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 29 650 IPR045274 GO:0007166
Accr7g02008 662 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Accr7g02008 662 Coils Coil 314 351 - -
Accr7g02008 662 SUPERFAMILY Protein kinase-like (PK-like) 354 651 IPR011009 -
Accr7g02008 662 Gene3D Transferase(Phosphotransferase) domain 1 448 658 - -
Accr7g02008 662 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 343 447 - -
Accr7g02008 662 ProSiteProfiles Protein kinase domain profile. 371 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g02008 662 FunFam Wall-associated receptor kinase-like 20 448 660 - -
Accr7g02008 662 SMART serkin_6 371 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g02008 662 MobiDBLite consensus disorder prediction 322 344 - -
Accr7g02008 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672|GO:0006468
Accr7g02008 662 CDD STKc_IRAK 377 644 - -
Accr7g02008 662 MobiDBLite consensus disorder prediction 322 345 - -
Accr7g02008 662 Gene3D Phosphorylase Kinase; domain 1 315 447 - -
Accr7g02008 662 ProSitePatterns Protein kinases ATP-binding region signature. 377 399 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g02008 Accr-Chr7 52675793 52678675 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g02008 15 662 Receptor kinase-like Gene Family AT5G02070 54.805 0.0 689
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Accr7g02008 PK_Tyr_Ser-Thr 1.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g02008 - - aprc:113862410 807.364