Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01998 ATGGCTCAGTCGTCGGGTCGGGCCGGTTTGGTGGGAGAATACATCATCGGGAAGCAAATTGGGTCCGGGTCTTTCTCGGTGGTATGGCATGGGAGGCACCGAGTCCATGGAACTGAGGTTGCCATTAAAGAGATCGCCACTGGTCGGCTTAACCAGAAGTTGCAGGAAAGTCTCATGTCTGAGATTTTTATCTTGAAGCGGATTAACCATCCTAATATAATTCGTTTGTACGATATAATTGAGGTTCCTGGGAAGATACATCTTGTGTTAGAATACTGTAGAGGGGGCGATCTCTCTATGTATATACAACGCCATGGAAGAGTCCAAGAAGGAACTGCAAAGTATTTTATGCAGCAGCTAGCTGCTGGCCTACAAGTTCTTCGAGATAATAATCTTATTCATAGAGATTTGAAACCACAGAATCTTCTCCTCACCAGAAAGGATGACAACTCAGTTCTGAAGATTGCTGATTTTGGATTTGCAAGATCTTTGCAACCTAGGGGTCTTGCAGAAACCTTGTGTGGTTCACCTCTCTACATGGCTCCAGAAATTATGCAACTACAGAAGTATGATGCTAAGGCAGACCTCTGGAGTGTGGGTGTGATCTTATTTCAGCTTGTTACAGGAAGAACACCATTTACTGGGAGTAATCAAATACAGTTACTACAGAACATTATAAAATCAACTGAATTGCAGTTCCCATCTGATAATCAAATTCTGAGTTCTGACTGTAAAGATTTATGTCAGAAATTGCTGCGACGTAGTCCAGTGGAACGGCTAACTTTTGAAGAATATTTTAATCATCCATTTCTTTGTCAGAAGCAACCAGAACAGGATAAATCATTGAGATGCGGAAGTTCTTCAAGGATGCGGGGTGGAATTTGCTTAACAGAGCCCACTCCTTTGAGAAGGGCCAAAGAAAATCATCAAGAGGACTGCTTACCTTTCTTTTTGGATGATGATTCTTGTCCTGGGGAAAGCCCATCTTTTCCAAGGAAGACATACTCAATAAAGTCTACTTATGGATTTGACCTTTATGCACAGAAAGATAGAGCAGGCTCAGCATTTGCTACTTCCAATAACGTAAATTTAACTCCCAGAAAGCAACCTGAAAACAGTGCTATAAGGTTGGACAGCCATAGAACCTCAGCAAGAAATCTCTCTGATCCACTACAATCTCTAGAACAGAGATTAGCAAACACTAGTTTAAGAGTTGCAGACTCACTAGAGAATATTGATCAAGATTATGTTCTTGTGTCTGGACCTCCTATGGATGTGTCATCATCTTCAGTGAGCGCACCAAAGCCAAGCCCTTTTCCATATAGATCAGGTGTTTCCCTACTGGAGTCTTCTAATGTAATTGATAGAGTAAGTTTTCCAATGCCAATAAGTGGCGCTGCAACCAGTAGCACATATCAAATTGGAAGTTTAGAAAGTCAGGACTCTGGTCCAGGGACTTCACATGCGTCAATGGATACAGGAGATGAGCAGCCATCAGCTGACTGCATGACCAGGATAAAATCATTGCAACGGTGTGCATCTGGCATAACTGAAGTAGTTCGCGAAAAGGTGGAGACTAGAAAGCTGCTGGAAGCATTCCCCGTTCAGCTTGTTATTCTTGCAATTTGGAAGCAAGCATTACACATATGCCATGCACAGGCTGCCTCTGCCATGGAAGGAAGTCCAAGTCAAGAAAGGTCTAGATGTAGGAGGAGCACCAACATGAAGCATGGCATTTCTGATTCAGAAGAGTGCCTTGATGGAAATGTGCAAGGGCCAAAGGATATTGTATCTCAAATTGGAAGTGAATTTCTAAGGGAACATAAGTTTGCTGAAGAACTTGCTAAGGATCTTGAGGGTGTTGATCGTGAAACAACGATGCCAGATGCAATGGAGACAATATTTCAGTCTGCCCTTGCTTTTGGGAGACTTGGGGCTGTAGAAGAGCTCATGGGTGCATTGGACAATGCACTTGCTGTGTATTCAATAGCTGTGCAGCTACTGTTGTTCCTTATAGTGGAAGCTCCATCCCTCATTGTAAATCCTCCATTTTCACTGACTAACACGGATCGTTACAGGCTTCGGTCTTACATCAATGATATAAACATCAGGAAAGACTATGTCAGGTCTCAGTTGCTGCTGAAACGGGATGAAGCCGAAGGTGGCCCTAAGAACAAGTTTTAG 2184 0.4299 MAQSSGRAGLVGEYIIGKQIGSGSFSVVWHGRHRVHGTEVAIKEIATGRLNQKLQESLMSEIFILKRINHPNIIRLYDIIEVPGKIHLVLEYCRGGDLSMYIQRHGRVQEGTAKYFMQQLAAGLQVLRDNNLIHRDLKPQNLLLTRKDDNSVLKIADFGFARSLQPRGLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGVILFQLVTGRTPFTGSNQIQLLQNIIKSTELQFPSDNQILSSDCKDLCQKLLRRSPVERLTFEEYFNHPFLCQKQPEQDKSLRCGSSSRMRGGICLTEPTPLRRAKENHQEDCLPFFLDDDSCPGESPSFPRKTYSIKSTYGFDLYAQKDRAGSAFATSNNVNLTPRKQPENSAIRLDSHRTSARNLSDPLQSLEQRLANTSLRVADSLENIDQDYVLVSGPPMDVSSSSVSAPKPSPFPYRSGVSLLESSNVIDRVSFPMPISGAATSSTYQIGSLESQDSGPGTSHASMDTGDEQPSADCMTRIKSLQRCASGITEVVREKVETRKLLEAFPVQLVILAIWKQALHICHAQAASAMEGSPSQERSRCRRSTNMKHGISDSEECLDGNVQGPKDIVSQIGSEFLREHKFAEELAKDLEGVDRETTMPDAMETIFQSALAFGRLGAVEELMGALDNALAVYSIAVQLLLFLIVEAPSLIVNPPFSLTNTDRYRLRSYINDINIRKDYVRSQLLLKRDEAEGGPKNKF 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01998 727 SUPERFAMILY Protein kinase-like (PK-like) 11 272 IPR011009 -
Accr7g01998 727 Coils Coil 391 411 - -
Accr7g01998 727 MobiDBLite consensus disorder prediction 475 494 - -
Accr7g01998 727 MobiDBLite consensus disorder prediction 475 499 - -
Accr7g01998 727 ProSitePatterns Protein kinases ATP-binding region signature. 20 43 IPR017441 GO:0005524
Accr7g01998 727 FunFam Serine/threonine-protein kinase ATG1 6 312 - -
Accr7g01998 727 CDD STKc_ATG1_ULK_like 20 270 - -
Accr7g01998 727 Gene3D Transferase(Phosphotransferase) domain 1 6 308 - -
Accr7g01998 727 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 3 638 IPR045269 GO:0004674|GO:0006914
Accr7g01998 727 ProSiteProfiles Protein kinase domain profile. 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g01998 727 SMART serkin_6 14 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g01998 727 FunFam Non-specific serine/threonine protein kinase 1 94 - -
Accr7g01998 727 Pfam Protein kinase domain 15 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr7g01998 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01998 Accr-Chr7 52565705 52573974 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01998 10 280 CBL-interacting serine-threonine protein kinases AT2G30360 37.184 6.74e-56 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Accr7g01998 Pkinase 6e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01998 K08269 - gmx:100791596 1010.36