Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01993 ATGGAGGAGGGTTTTGAGCCTTACCATGTTCCTCAGCAAAGCAGGAGAGACAAACTCAGGGTCGGATTTCATCACAACCAACACTCTTCCCTTCCCACCACGGCGGCGTGCGGCGGTTTACTTCCTACGGTTTCTGACCCTTCCCTTATTCCCTCCGATCTGCTAACGTGTGCCAACAATGATCCTCAATCTTCGAATTTGCAAATAGACCCCGCAACTGTTCAAATTATCAACAACAACCCTTTTCTTAACTTCCCTCTCGCTCAAACCCTTCGCGCCGAGCCATTGTCTTTATCTCTCTACACTCCGCAAGCCAATCTTAACAGTAATCCCCCACTTGAGCTGAATCTTCAGAGATATGATGGTGGCGGCGGCTCCGTAAATAATATCCAGGCCGCCAACGACGCCGTTTTGAGAAGCTCCGTCGTCGTGCCGGTGGGGCCCTTTACTGGTTACGCTTCCGTGTTGAAGGGATCGAGGTTTCTGAAGCCAGCTCAACAGTTATTGGAGGAGCTTTGCGACGTTGGGGGTCGTGAAATTTGCGCTGCAGAAAAGTTGACGGCGGACGCTTCGTTAATGGAACCTCCTCCGACGTCGGAGAGCCTCGGCTTTGGCGATCCGCCGCAGCCGGCTCTTGGAGATGGCGGTGGGGAGGGTGGGAAGAAAAAGTCGAGACTGTTAACGATGCTTGATGAGGTGTTCAGAAGGTACAGGCAGTACTATCAACAGATACAAGCAGTAGTAACTTCATTTGAGTATGTTTCAGGCCTTGGTAACGCAGCTCCTTATGCCATCCTAGCGATAAATGCCATGACCAAGCATTTCAAATGCTTGAAGACTCTGATTATGGACCAGCTTCAGTTCACTAACAAGTCTCATTTTCACAATATGAGCAACAAAAAAGATGAATCTCAAAGGTTTGGAAATGTTGACCATAGAGGAGCAGGACCTTACAGCCAAATTAGGGATACTCAAAACCCTGAATTATTAGGGAACCAACCGATCTGGAGACCTCAACGAGGACTCCCCGAGCGTGCGGTGACCGTTCTTCGGGCTTGGTTGTTTGAGCACTTTCTTCACCCATATCCTACTGATACGGACAAGCTGATGCTGGCGAGACAGACCGGTCTGTCTCGTAGCCAGGTATCAAACTGGTTCATCAATGCAAGAGTAAGGTTGTGGAAACCTATGGTTGAAGAAATACACATGCTAGAAACAAGACAGTCTCAAAAGAATCATCAGAACACAGAAGATCACAACAAGAATAAGCCTAGCACAAGTGACAAGTTTCAGCAAGATGATGCTCCTTTTAAACGCACCAGAAATTATGAACCCACTACTCAAAATGATATGTCGGCGTCACTGACCAATCGTCAGCTGCCATTTAATGCAATAAGCAGTGTCAATAATAGTAATCAGCCAGTGAGTGTTGGAGCTGTGGCCAATAGCGTGTCGCTCACACTGGGTCTCCACCAGAACAACGGTGGTCTTGCTCTATCTGAACCTTTTCCCATGAGTGAAGCTCTCCGTTTTGGGCTTGCCCTAGAAGTACCCAGTAACGAAGAGTATGTAATGAGTGGTTCTGAATCGCAGAATCGGCATTATGGAAGAGATCATCAGGTGATTGGAGGGCAACTTGTGCATGACTTTGTTGGCTAA 1659 0.4798 MEEGFEPYHVPQQSRRDKLRVGFHHNQHSSLPTTAACGGLLPTVSDPSLIPSDLLTCANNDPQSSNLQIDPATVQIINNNPFLNFPLAQTLRAEPLSLSLYTPQANLNSNPPLELNLQRYDGGGGSVNNIQAANDAVLRSSVVVPVGPFTGYASVLKGSRFLKPAQQLLEELCDVGGREICAAEKLTADASLMEPPPTSESLGFGDPPQPALGDGGGEGGKKKSRLLTMLDEVFRRYRQYYQQIQAVVTSFEYVSGLGNAAPYAILAINAMTKHFKCLKTLIMDQLQFTNKSHFHNMSNKKDESQRFGNVDHRGAGPYSQIRDTQNPELLGNQPIWRPQRGLPERAVTVLRAWLFEHFLHPYPTDTDKLMLARQTGLSRSQVSNWFINARVRLWKPMVEEIHMLETRQSQKNHQNTEDHNKNKPSTSDKFQQDDAPFKRTRNYEPTTQNDMSASLTNRQLPFNAISSVNNSNQPVSVGAVANSVSLTLGLHQNNGGLALSEPFPMSEALRFGLALEVPSNEEYVMSGSESQNRHYGRDHQVIGGQLVHDFVG 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01993 552 FunFam BEL1-like homeodomain protein 9 339 401 - -
Accr7g01993 552 SMART HOX_1 336 400 IPR001356 GO:0003677
Accr7g01993 552 SUPERFAMILY Homeodomain-like 338 403 IPR009057 -
Accr7g01993 552 Pfam Associated with HOX 155 282 IPR006563 -
Accr7g01993 552 SMART prehox3 150 284 IPR006563 -
Accr7g01993 552 CDD homeodomain 336 397 IPR001356 GO:0003677
Accr7g01993 552 MobiDBLite consensus disorder prediction 406 440 - -
Accr7g01993 552 Gene3D - 339 401 - -
Accr7g01993 552 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 66 419 - -
Accr7g01993 552 ProSiteProfiles 'Homeobox' domain profile. 333 396 IPR001356 GO:0003677
Accr7g01993 552 MobiDBLite consensus disorder prediction 406 454 - -
Accr7g01993 552 MobiDBLite consensus disorder prediction 192 221 - -
Accr7g01993 552 Pfam Homeobox KN domain 353 392 IPR008422 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01993 Accr-Chr7 52414502 52419470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01993 90 552 Homeobox Transcription Factor Family AT5G02030 45.892 9.26e-105 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Accr7g01993 POX 3.7e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01993 - - qsa:O6P43_016709 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g01993 7 52414502 52419470 Accr7g01993 7 52414502 52419470 ECH