Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01970 ATGTTACCAATTATTCGGATACGCCATGCAGATTTGGAGCAAGGAAGGCACGGCTGTGACATGATTGGTGAGGCTAGAATTAGTCTCTCTAAGGCTAGAGATAGAGAGTGTAGGATTTGTCACATGGGTTTGGAGAGTGATAGGCATGTATCTGGGGTTCCAATTGAATTGGGTTGTTCCTGCAAGCATGATCTTGCTGCTGCTCATAAACTCTGTGCTGAAAAGTGGTTCAGAAGTCAAGGGAATAGGACCTGCGAAATCTGTCATTCTGTGGCACGGAATGTTTTTGCAACAAATGAGGAGACAACTGAGAATTTAAGGGACAGAAACAACGTTATAATAGTATCCACAACTCAACCAGAATCGCCTCGAAGTTTTTGTCTAGATCGTAGCTTCCTGAAATTTTGTATGTTTATCATATTTATCAGTGCATTTATCGCATTTATGTTCTTTCGGTACTGA 462 0.4134 MLPIIRIRHADLEQGRHGCDMIGEARISLSKARDRECRICHMGLESDRHVSGVPIELGCSCKHDLAAAHKLCAEKWFRSQGNRTCEICHSVARNVFATNEETTENLRDRNNVIIVSTTQPESPRSFCLDRSFLKFCMFIIFISAFIAFMFFRY 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01970 153 SMART ringv_2 36 89 IPR011016 GO:0008270
Accr7g01970 153 PANTHER ZINC FINGER, RING-CH-TYPE 26 147 - -
Accr7g01970 153 ProSiteProfiles Zinc finger RING-CH-type profile. 29 95 IPR011016 GO:0008270
Accr7g01970 153 SUPERFAMILY RING/U-box 32 92 - -
Accr7g01970 153 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 22 100 IPR013083 -
Accr7g01970 153 Pfam RING-variant domain 37 88 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01970 Accr-Chr7 51992885 51993807 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01970 11 150 C3H Transcription Factor Family AT5G05830 45.000 1.46e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01970 - - qsa:O6P43_016683 146.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g01970 7 51992885 51993807 Accr7g01970 7 51992885 51993807 ECH