Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01969 ATGTCATCAATTAGACCGATTTCCCTTGTAGATTTGGAGCAAGCTAGCCATCGCAGTGACATGAGTGCCGAAGCTAGCATTTGTTTCTCTGATGCTGAAGAGGGTTCTTGCTATTCCCACTTCTATTCAACAAACGGTGGCTCATACGATGACTATAGCTTTGCTTGTGTTTCTGATCCTGAGGTTATTGAGGGTGTGGGTGTTCCTGAGTCTGCTAGAGCTTCTTCTTCGTCTTCTGTCACCGAATGTTCAGTGGAGGTTGAAATTGAAAGTGGGGTTCCTGAAATTAAGGTGCATTTGGATATTGTAGAGAAAGAGTGTAGGATTTGTCACATGGGTTTGGAAAGTGAAAGCCATGAATCTGGGGTTCCAATTGAATTGGGTTGTTCCTGTAAGGATGATCTTGCTTCTGCTCATAAACTCTGTGCTGAAACTTGGTTCAAGATTAAAGGCAACAGGACCTGTGAAATCTGTCATTCTGCGGCACGGAATGTATTTGCACCTATAGAGGAGACGACTGAGAATTTAAGTGATAGCAGCAACACTATCACATTATCAACACTCCCAGCGCCAGTTTCCCCAGAAACTCGAAGATTCTGGCAGGGCCGCAGCTTCCTGAATTTACTGCTTATTTGTATGGTTATAGCATTTGTCATATCATGGGCTTTTCACTTCCATTTTCATTCACCTTAG 693 0.4329 MSSIRPISLVDLEQASHRSDMSAEASICFSDAEEGSCYSHFYSTNGGSYDDYSFACVSDPEVIEGVGVPESARASSSSSVTECSVEVEIESGVPEIKVHLDIVEKECRICHMGLESESHESGVPIELGCSCKDDLASAHKLCAETWFKIKGNRTCEICHSAARNVFAPIEETTENLSDSSNTITLSTLPAPVSPETRRFWQGRSFLNLLLICMVIAFVISWAFHFHFHSP 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01969 230 SUPERFAMILY RING/U-box 103 161 - -
Accr7g01969 230 SMART ringv_2 106 159 IPR011016 GO:0008270
Accr7g01969 230 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 99 167 IPR013083 -
Accr7g01969 230 PANTHER ZINC FINGER, RING-CH-TYPE 15 227 - -
Accr7g01969 230 Pfam RING-variant domain 107 158 IPR011016 GO:0008270
Accr7g01969 230 ProSiteProfiles Zinc finger RING-CH-type profile. 99 165 IPR011016 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01969 Accr-Chr7 51908077 51911202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01969 78 229 C3H Transcription Factor Family AT5G05830 56.774 3.11e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01969 - - gmx:100808666 307.76