Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01966 ATGGAAGTAGATGAAAAACCCGTTGTTGAGCTCGACAAACCACCCGCCGGGGACGTTGGCGGGGGTGGAGACGGCGGTAGTGGCGATGAGGGTTTAACAGCGTTAGGTGACGGCGGTGGGAGTGGCTCCCAGGGGGCTAAAGACAGAGTGAAGGGTCCTTGGTCTCCAGAGGAGGATGCGATACTGAGTCGACTTGTTAGCAAGTTCGGCGCCAGAAATTGGAGCTTAATTGCTCGCGGGATCGCTGGAAGATCCGGCAAGTCTTGCCGGCTCCGGTGGTGTAATCAACTCGACCCAGCTGTCAAGCGCAAGCCCTTTTCTGATGATGAGGATCGGATCATAGTTGCAGCACATGCAATCCACGGGAACAAATGGGCAGCCATAGCCAGACTTCTACCAGGAAGAACAGATAATGCCATTAAGAATCATTGGAATTCTACTTTGAGGCGTCGGGGAATAGAACTTGATAAAGTTAAATTAGAACCTTACAACACGGTGGAAGATGTTAGCTTGGAGAAAGCAAAAGCATCATCAGAAGAGACTCAGTCATGTGGGGATGTTAATTCCTTGAGATCCTCAGAAGGAAGAGATGTCAGTTCTGTGGAGAATATGGAGGATAAATATGAAGACAAAGCACAGACAGAGAGTCAAATGAACCATGAAGTCAAGGATCCGCCTACTCTTTTCCGACCTCTAGCACGTATTAGTGCTTTTAGTGTGTATAACTCATTGGATGGTTCACAAACTGCAACATCAGCCTCTAGGCCAGTTCCAATGCCAGGACCTCTTTTTCAAGCATCCAAGCCAGGTATTGAGATTTGTAAAATGCTGGATGGAATTTATGGCTGTGACCTATCTGTTCCTAACCACTGTGGCCATGGTTGTTGCACTGGTCTAAGTGGTGAAAGTGGCAAAAGCTCCTTGTTGGGGCCAGAATTTATTGAATTCTCAGAGCCCCCGTCGTTCCCAAGTTTTGAGTTGGCAGCCATAGCTACAGACATCAGTAACCTTGCTTGGCTGAAAAGTGGATTGGAGAATAGTAGTGTCAAGATGATGGGTGACTCAGCCGGCAGGTATTCTGCAATCTCTCCCAAGTCAAATCCATCGTCACAAAGGTATTGGATGGATTGA 1131 0.4792 MEVDEKPVVELDKPPAGDVGGGGDGGSGDEGLTALGDGGGSGSQGAKDRVKGPWSPEEDAILSRLVSKFGARNWSLIARGIAGRSGKSCRLRWCNQLDPAVKRKPFSDDEDRIIVAAHAIHGNKWAAIARLLPGRTDNAIKNHWNSTLRRRGIELDKVKLEPYNTVEDVSLEKAKASSEETQSCGDVNSLRSSEGRDVSSVENMEDKYEDKAQTESQMNHEVKDPPTLFRPLARISAFSVYNSLDGSQTATSASRPVPMPGPLFQASKPGIEICKMLDGIYGCDLSVPNHCGHGCCTGLSGESGKSSLLGPEFIEFSEPPSFPSFELAAIATDISNLAWLKSGLENSSVKMMGDSAGRYSAISPKSNPSSQRYWMD 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01966 376 SUPERFAMILY Homeodomain-like 48 144 IPR009057 -
Accr7g01966 376 PANTHER MYB PROTEIN-RELATED 51 205 - -
Accr7g01966 376 Pfam Myb-like DNA-binding domain 54 111 - -
Accr7g01966 376 MobiDBLite consensus disorder prediction 1 54 - -
Accr7g01966 376 ProSiteProfiles Myb-like domain profile. 98 148 IPR001005 -
Accr7g01966 376 MobiDBLite consensus disorder prediction 174 203 - -
Accr7g01966 376 Gene3D - 105 151 - -
Accr7g01966 376 SMART sant 50 99 IPR001005 -
Accr7g01966 376 SMART sant 102 150 IPR001005 -
Accr7g01966 376 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 101 IPR017930 -
Accr7g01966 376 Gene3D - 50 102 - -
Accr7g01966 376 CDD SANT 53 95 IPR001005 -
Accr7g01966 376 MobiDBLite consensus disorder prediction 176 197 - -
Accr7g01966 376 ProSiteProfiles Myb-like domain profile. 46 97 IPR001005 -
Accr7g01966 376 FunFam MYB transcription factor 51 102 - -
Accr7g01966 376 CDD SANT 105 148 IPR001005 -
Accr7g01966 376 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 102 152 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01966 Accr-Chr7 51890401 51895115 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr7g01966 40 359 MYB Transcription Factor Family AT3G09230 50.303 6.42e-103 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr7g01966 Myb_DNA-bind_6 4e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01966 K09422 - jre:108985534 492.656