Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr7g01936 ATGAACAGGGGAATTGAAGTTTTCTCTCCAGCTTCTTACCTTGAAAACTCCAATTGGTTGTTCCAAGAAAGCAAAGGAACAAAATGGACCTCAGAAGAGAACAAGCGATTTGAAGATGCTTTGGCCTTGTACGACAAAGATACGCCAGATCGTTGGTTGAAAGTTGCAGCTAAAGTTCCAGGGAAGACAGTGGGAGATGTGATTAGGCAGTACAAACAACTTGAAGAAGATGTTAGTGTCATTGAGGCAGGGTTGATTCCAGTGAGTGAGTATGATGATAACAACAGTTCTTTCACCTTGGAATGGGCCAATAATAATAACCAAGGCTTTGATGATTTCAAGCCATTCTATAGTGTTGGTGAGAAAAGAGGTTCTTCCACTCGACCATCTGAGCAGGAAAGGAAAAAAGGAGTGCCATGGACTGAAGAGGAGCACAGGCAATTTCTGATGGGACTGAAGAAGTATGGCAAAGGGGATTGGAGAAACATATCTCGTAATTTTGTGACTACAAGGACACCAACTCAGGTTGCTAGTCATGCTCAGAAGTATTTTATCAGGCAGCTTACGGGAGGCAAGGACAAGAGGAGATCAAGCATCCATGACATCACAATTGTCAACCTTGAAACCAAGTCTTCGTCGTCTCCGTCAGACACTCACAGGCCTTCTTCTTCTCCTCCTGATCGCTCGGAGAAGGCTGTGAATGATCATCTGCCTAATAAGAATCCGAATTTCCCTACCATGATGGTTAAACAGGAGTATGACTCGAACTCGCCATTCGAGTCCATGCCAATGATTTTCAATTCAGCAAATGGAAACATGTTCATGCCACCACCGTATTTTGGAATTTCTTCGGTTGGATCTGGGCCTCAGGAGCAGTGTTTACTCAGAGGTTCTCTCTGA 900 0.44 MNRGIEVFSPASYLENSNWLFQESKGTKWTSEENKRFEDALALYDKDTPDRWLKVAAKVPGKTVGDVIRQYKQLEEDVSVIEAGLIPVSEYDDNNSSFTLEWANNNNQGFDDFKPFYSVGEKRGSSTRPSEQERKKGVPWTEEEHRQFLMGLKKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQLTGGKDKRRSSIHDITIVNLETKSSSSPSDTHRPSSSPPDRSEKAVNDHLPNKNPNFPTMMVKQEYDSNSPFESMPMIFNSANGNMFMPPPYFGISSVGSGPQEQCLLRGSL 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr7g01936 299 SUPERFAMILY Homeodomain-like 133 187 IPR009057 -
Accr7g01936 299 Gene3D - 21 88 - -
Accr7g01936 299 Gene3D - 138 188 - -
Accr7g01936 299 MobiDBLite consensus disorder prediction 208 248 - -
Accr7g01936 299 SMART sant 25 77 IPR001005 -
Accr7g01936 299 SMART sant 136 186 IPR001005 -
Accr7g01936 299 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN-RELATED 23 245 IPR043363 -
Accr7g01936 299 FunFam transcription factor MYB1R1 138 189 - -
Accr7g01936 299 SUPERFAMILY Homeodomain-like 27 82 IPR009057 -
Accr7g01936 299 CDD SANT 139 184 IPR001005 -
Accr7g01936 299 CDD SANT 28 74 IPR001005 -
Accr7g01936 299 MobiDBLite consensus disorder prediction 126 141 - -
Accr7g01936 299 MobiDBLite consensus disorder prediction 208 222 - -
Accr7g01936 299 FunFam Transcription factor SRM1 21 88 - -
Accr7g01936 299 ProSiteProfiles Myb-like domain profile. 132 184 IPR001005 -
Accr7g01936 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 132 188 IPR017930 -
Accr7g01936 299 MobiDBLite consensus disorder prediction 121 141 - -
Accr7g01936 299 Pfam Myb-like DNA-binding domain 139 184 IPR001005 -
Accr7g01936 299 Pfam Myb-like DNA-binding domain 28 74 IPR001005 -
Accr7g01936 299 NCBIfam myb-like DNA-binding domain, SHAQKYF class 135 187 IPR006447 GO:0003677
Accr7g01936 299 ProSiteProfiles SANT domain profile. 140 188 IPR017884 -
Accr7g01936 299 ProSiteProfiles SANT domain profile. 24 79 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr7g01936 Accr-Chr7 51400435 51401850 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Accr7g01936 Myb_DNA-binding 2.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr7g01936 - - gmx:100775697 407.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr7g01936 7 51400435 51401850 Accr7g01936 7 51400435 51401850 ECH
Accr7g01936 7 51400435 51401850 Accr3g01449 3 16763881 16764966 ECH
Accr3g01449 3 16763881 16764966 Accr7g01936 7 51400435 51401850 ECH